RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 RHOT1Q8IXI2 618 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 PHACTR4Q8IZ21 702 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 NDUFAF2Q8N183 169 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 GALNT15Q8N3T1 639 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 PLA2G15Q8NCC3 412 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 ZNF548Q8NEK5 533 aaPredicted RBP7.27□□□□□ -1.25
RBM39-239ENST00000494274 OR4C6Q8NH72 309 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 BTN2A2Q8WVV5 523 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 GATA6Q92908 595 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 TSACCQ96A04 125 aaPredicted RBP7.27□□□□□ -1.25
RBM39-239ENST00000494274 APOLD1Q96LR9 279 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 ZNF830Q96NB3 372 aaPredicted RBP7.27□□□□□ -1.25
RBM39-239ENST00000494274 LGMNQ99538 433 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 IL12RB2Q99665 862 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 MGME1Q9BQP7 344 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 POLR1EQ9GZS1 481 aaKnown RBP7.27□□□□□ -1.25
RBM39-239ENST00000494274 ABCG4Q9H172 646 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 GPR27Q9NS67 375 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 NLGN3Q9NZ94 848 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 DTLQ9NZJ0 730 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 SEPT10Q9P0V9 454 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 SPASTQ9UBP0 616 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 APOBEC3BQ9UH17 382 aaKnown RBP7.27□□□□□ -1.25
RBM39-239ENST00000494274 INTUQ9ULD6 942 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 ZMIZ1Q9ULJ6 1067 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 PHTF1Q9UMS5 762 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 DOLKQ9UPQ8 538 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 PCDHGA1Q9Y5H4 931 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 PCDHA13Q9Y5I0 950 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 RAI2Q9Y5P3 530 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 ALG6Q9Y672 507 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 CACNA1EQ15878 2313 aa7.27□□□□□ -1.25
RBM39-239ENST00000494274 PCDH15Q96QU1 1955 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 A0A1W2PQ67 120 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 CPED1A4D0V7 1026 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 CFAP69A5D8W1 941 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 GOLGA6CA6NDK9 693 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 GOLGA6BA6NDN3 693 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 TRABD2BA6NFA1 517 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 CACNB4O00305 520 aaPredicted RBP7.26□□□□□ -1.25
RBM39-239ENST00000494274 TOR1BO14657 336 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 HTRA2O43464 458 aaPredicted RBP7.26□□□□□ -1.25
RBM39-239ENST00000494274 GCATO75600 419 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 KRT37O76014 449 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 MTA2O94776 668 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 DKK1O94907 266 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 PGLSO95336 258 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 TNFP01375 233 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 ANXA6P08133 673 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 ALPIP09923 528 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 GOLGA6DP0CG33 693 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 GIMD1P0DJR0 217 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 CYP2A6P11509 494 aaPredicted RBP7.26□□□□□ -1.25
RBM39-239ENST00000494274 CDK4P11802 303 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 KRT10P13645 584 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 TSHRP16473 764 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 ZFXP17010 805 aaPredicted RBP7.26□□□□□ -1.25
RBM39-239ENST00000494274 HNF1BP35680 557 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 ETV3P41162 512 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 ACADVLP49748 655 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 PEX5P50542 639 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 BLKP51451 505 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 DUSP3P51452 185 aaPredicted RBP7.26□□□□□ -1.25
RBM39-239ENST00000494274 SRP54P61011 504 aaKnown RBP7.26□□□□□ -1.25
RBM39-239ENST00000494274 AP1B1Q10567 949 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 RALGDSQ12967 914 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 TARDBPQ13148 414 aaKnown RBP eCLIP7.26□□□□□ -1.25
RBM39-239ENST00000494274 SMAD1Q15797 465 aaKnown RBP7.26□□□□□ -1.25
RBM39-239ENST00000494274 CDKN3Q16667 212 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 PROX2Q3B8N5 592 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 RALGPS1Q5JS13 557 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 LRRC38Q5VT99 294 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 MFSD7Q6UXD7 560 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 MACC1Q6ZN28 852 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 NYAP1Q6ZVC0 841 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 Q6ZVL8 140 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 USP45Q70EL2 814 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 KDELC2Q7Z4H8 507 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 TMPRSS12Q86WS5 348 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 CCDC13Q8IYE1 715 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 CCDC170Q8IYT3 715 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 TEX26Q8N6G2 289 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 PLD5Q8N7P1 536 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 TPCN2Q8NHX9 752 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 MDM1Q8TC05 714 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 ZCCHC14Q8WYQ9 949 aaKnown RBP7.26□□□□□ -1.25
RBM39-239ENST00000494274 FAF2Q96CS3 445 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 SCRN2Q96FV2 425 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 MRFAP1L1Q96HT8 127 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 TSGA13Q96PP4 275 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 SMIM14Q96QK8 99 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 DUSP23Q9BVJ7 150 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 TMEM121BQ9BXQ6 578 aaPredicted RBP7.26□□□□□ -1.25
RBM39-239ENST00000494274 CEP41Q9BYV8 373 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 GOLPH3Q9H4A6 298 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 CCDC86Q9H6F5 360 aaKnown RBP7.26□□□□□ -1.25
RBM39-239ENST00000494274 SUDS3Q9H7L9 328 aaPredicted RBP7.26□□□□□ -1.25
RBM39-239ENST00000494274 LUC7LQ9NQ29 371 aaKnown RBP7.26□□□□□ -1.25
RBM39-239ENST00000494274 HAUS2Q9NVX0 235 aa7.26□□□□□ -1.25
RBM39-239ENST00000494274 DDX56Q9NY93 547 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms