RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ITKQ08881 620 aa22.73■■□□□ 1.23
SNIP1-203ENST00000493916 PDK1Q15118 436 aa22.73■■□□□ 1.23
SNIP1-203ENST00000493916 ARMC12Q5T9G4 340 aa22.73■■□□□ 1.23
SNIP1-203ENST00000493916 KDM7AQ6ZMT4 941 aa22.73■■□□□ 1.23
SNIP1-203ENST00000493916 KATNAL2Q8IYT4 538 aa22.73■■□□□ 1.23
SNIP1-203ENST00000493916 SLC25A45Q8N413 288 aa22.73■■□□□ 1.23
SNIP1-203ENST00000493916 TPCN2Q8NHX9 752 aa22.73■■□□□ 1.23
SNIP1-203ENST00000493916 PDCD6IPQ8WUM4 868 aaKnown RBP22.73■■□□□ 1.23
SNIP1-203ENST00000493916 LRRN4Q8WUT4 740 aa22.73■■□□□ 1.23
SNIP1-203ENST00000493916 CNDP2Q96KP4 475 aaKnown RBP22.73■■□□□ 1.23
SNIP1-203ENST00000493916 RAI2Q9Y5P3 530 aa22.73■■□□□ 1.23
SNIP1-203ENST00000493916 LRRK1Q38SD2 2015 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 ENC1O14682 589 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 FZD6O60353 706 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 HLA-DQB2P05538 268 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 PEX5P50542 639 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 THOP1P52888 689 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 TFDP2Q14188 446 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 MACC1Q6ZN28 852 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 DAAM2Q86T65 1068 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 CHCHD4Q8N4Q1 142 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 PNPLA1Q8N8W4 532 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 ARRDC2Q8TBH0 407 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 MCCC1Q96RQ3 725 aaPredicted RBP22.72■■□□□ 1.23
SNIP1-203ENST00000493916 IL12RB2Q99665 862 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 BRD8Q9H0E9 1235 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 UCKL1Q9NWZ5 548 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.72■■□□□ 1.23
SNIP1-203ENST00000493916 PPIL1Q9Y3C6 166 aa22.72■■□□□ 1.23
SNIP1-203ENST00000493916 FAM221BA6H8Z2 402 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 H3BM21 787 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 PPP1R12AO14974 1030 aaPredicted RBP22.71■■□□□ 1.23
SNIP1-203ENST00000493916 NEBLO76041 1014 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 RECQL5O94762 991 aaPredicted RBP22.71■■□□□ 1.23
SNIP1-203ENST00000493916 GM2AP17900 193 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 SPINK2P20155 84 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 VIPR1P32241 457 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 VAV2P52735 878 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 DSC2Q02487 901 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 EIF2B5Q13144 721 aaKnown RBP22.71■■□□□ 1.23
SNIP1-203ENST00000493916 MTM1Q13496 603 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 SPOCD1Q6ZMY3 1216 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 ACRBPQ8NEB7 543 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 OR4C6Q8NH72 309 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 PIH1D2Q8WWB5 315 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 SCRN2Q96FV2 425 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 CNTNAP3BQ96NU0 1288 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 CNTNAP3Q9BZ76 1288 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 KLF15Q9UIH9 416 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 PCDHGA1Q9Y5H4 931 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 CHD8Q9HCK8 2581 aa22.71■■□□□ 1.23
SNIP1-203ENST00000493916 KCNK1O00180 336 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 PJA2O43164 708 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 HEXIM1O94992 359 aaKnown RBP22.7■■□□□ 1.22
SNIP1-203ENST00000493916 CYP2A6P11509 494 aaPredicted RBP22.7■■□□□ 1.22
SNIP1-203ENST00000493916 CA4P22748 312 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 NR2C2P49116 596 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 DYNLT1P63172 113 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 ZNF211Q13398 564 aaPredicted RBP22.7■■□□□ 1.22
SNIP1-203ENST00000493916 IHHQ14623 411 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 CNGA3Q16281 694 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 ZNF542PQ5EBM4 170 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 TFDP3Q5H9I0 405 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 NPNTQ6UXI9 565 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 USP45Q70EL2 814 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 RCOR2Q8IZ40 523 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 ZNF548Q8NEK5 533 aaPredicted RBP22.7■■□□□ 1.22
SNIP1-203ENST00000493916 RBM41Q96IZ5 413 aaKnown RBP22.7■■□□□ 1.22
SNIP1-203ENST00000493916 TBATAQ96M53 351 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 COQ10AQ96MF6 247 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 TDRD1Q9BXT4 1180 aaKnown RBP22.7■■□□□ 1.22
SNIP1-203ENST00000493916 LACRTQ9GZZ8 138 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 NLGN3Q9NZ94 848 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 KLK13Q9UKR3 277 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 TTLL3Q9Y4R7 772 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 DUSP10Q9Y6W6 482 aa22.7■■□□□ 1.22
SNIP1-203ENST00000493916 FRYQ5TBA9 3013 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 NEMP2A6NFY4 417 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 NPIPB15A6NHN6 443 aaPredicted RBP22.69■■□□□ 1.22
SNIP1-203ENST00000493916 GOLGA8CPA6NN73 597 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 PSMD11O00231 422 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 TRIM38O00635 465 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 ZRANB2O95218 330 aaKnown RBP eCLIP22.69■■□□□ 1.22
SNIP1-203ENST00000493916 JCHAINP01591 159 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 PCCBP05166 539 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 PDHA1P08559 390 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 GIMD1P0DJR0 217 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 KRT10P13645 584 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 JUNDP17535 347 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 TGM2P21980 687 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 LHCGRP22888 699 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 MARCKSL1P49006 195 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 NIPAL4Q0D2K0 466 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 AP1B1Q10567 949 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 ZBTB17Q13105 803 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 INPP5AQ14642 412 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 NFATC4Q14934 902 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 PROX2Q3B8N5 592 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 BZW1Q7L1Q6 419 aaKnown RBP22.69■■□□□ 1.22
SNIP1-203ENST00000493916 NDUFAF2Q8N183 169 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms