RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ZNF730Q6ZMV8 503 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 FRRS1Q6ZNA5 592 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 CMTR2Q8IYT2 770 aaKnown RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ABRAQ8N0Z2 381 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 HDDC3Q8N4P3 179 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 GPR156Q8NFN8 814 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 PPCDCQ96CD2 204 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 IL22Q9GZX6 179 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 COMMD4Q9H0A8 199 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 XKR8Q9H6D3 395 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 TMEM27Q9HBJ8 222 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 PCDHGB5Q9Y5G0 923 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 AP4B1Q9Y6B7 739 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 CAPN6Q9Y6Q1 641 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 A0A075B6Q4 140 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 C2orf71A6NGG8 1288 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 RIIAD1A6NNX1 92 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 RFXANKO14593 260 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 PDCD5O14737 125 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 CSF1RP07333 972 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 SUPT20HL2P0C7V6 817 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 HGFP14210 728 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 AMPD1P23109 780 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ADRA1DP25100 572 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 PTX3P26022 381 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 GNALP38405 381 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 FAM182BQ5T319 152 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 CLEC17AQ6ZS10 378 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 LSM14AQ8ND56 463 aaKnown RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 PPP1R13LQ8WUF5 828 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 TAAR1Q96RJ0 339 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ZFP14Q9HCL3 533 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 PIH1D1Q9NWS0 290 aaKnown RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ZNF180Q9UJW8 692 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ZNRF3Q9ULT6 936 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 RBMX2Q9Y388 322 aaKnown RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 CASTOR2A6NHX0 329 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 FFAR3O14843 346 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 GPR42O15529 346 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 ERAL1O75616 437 aaKnown RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 YBX3P16989 372 aaKnown RBP eCLIP7.88□□□□□ -1.157e-6■■■□□ 18.9
BRCA1-221ENST00000493795 RPL21P46778 160 aaKnown RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 HERVK_113P62684 666 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 MC1RQ01726 317 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 ST3GAL1Q11201 340 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 MFSD10Q14728 455 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 FSCN1Q16658 493 aaKnown RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 RNF43Q68DV7 783 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 RAET1GQ6H3X3 334 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 C16orf86Q6ZW13 317 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 C16orf59Q7L2K0 433 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 TDRPQ86YL5 185 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 ZCCHC9Q8N567 271 aaKnown RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 CDYL2Q8N8U2 506 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 SPATA20Q8TB22 786 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 RDH11Q8TC12 318 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 PIWIL2Q8TC59 973 aaKnown RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 RC3H2Q9HBD1 1191 aaKnown RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 RDH8Q9NYR8 311 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 EIF3KQ9UBQ5 218 aaKnown RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 ZNF70Q9UC06 446 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 CARD8Q9Y2G2 431 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 A8MX80 341 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 M0R036 132 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 AP5Z1O43299 807 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 KDM4BO94953 1096 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 IDO1P14902 403 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 GALK1P51570 392 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 PCDH1Q08174 1060 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 ZNF844Q08AG5 666 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 LACTB2Q53H82 288 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 ATXN7L2Q5T6C5 722 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 NEPROQ6NW34 567 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 CRTC3Q6UUV7 619 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 SIRT2Q8IXJ6 389 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 SEPT12Q8IYM1 358 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 MCOLN2Q8IZK6 566 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 FUKQ8N0W3 1084 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 PCSK9Q8NBP7 692 aaKnown RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 IDI2Q9BXS1 227 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 OSGEPQ9NPF4 335 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 ZNHIT2Q9UHR6 403 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 SHANK2Q9UPX8 1470 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 H3BQF6 201 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 PDE2AO00408 941 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 GLI1P08151 1106 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 PSMA1P25786 263 aaKnown RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 MAPK8P45983 427 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 TTPAP49638 278 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 CAV3P56539 151 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 HSPA14Q0VDF9 509 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 SNAPC1Q16533 368 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 RFTN2Q52LD8 501 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 OR2L8Q8NGY9 312 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 C17orf50Q8WW18 174 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 NSUN4Q96CB9 384 aaKnown RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 FAM84BQ96KN1 310 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 FERD3LQ96RJ6 166 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 ASB8Q9H765 288 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 L2HGDHQ9H9P8 463 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms