RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 PARP15Q460N3 678 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 CERCAMQ5T4B2 595 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 PHF19Q5T6S3 580 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 SPRED1Q7Z699 444 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 ZSWIM9Q86XI8 627 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 OR56A4Q8NGH8 313 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 USP7Q93009 1102 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 GANQ9H2C0 597 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 FGF22Q9HCT0 170 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 MRPL40Q9NQ50 206 aaKnown RBP12.41□□□□□ -0.42
SAMM50-205ENST00000493621 SAMSN1Q9NSI8 373 aaKnown RBP12.41□□□□□ -0.42
SAMM50-205ENST00000493621 STARD5Q9NSY2 213 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 TAB2Q9NYJ8 693 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 FOXJ2Q9P0K8 574 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 LRIT1Q9P2V4 623 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 ATP8A1Q9Y2Q0 1164 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 PCDHGA4Q9Y5G9 962 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 DGKBQ9Y6T7 804 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 RNF215Q9Y6U7 377 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 WASH4PA8MWX3 477 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 J3KR12 359 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 CACNB4O00305 520 aaPredicted RBP12.4□□□□□ -0.42
SAMM50-205ENST00000493621 CCP110O43303 1012 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 UNGP13051 313 aaPredicted RBP12.4□□□□□ -0.42
SAMM50-205ENST00000493621 PNLIPP16233 465 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 ITGB6P18564 788 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 ERCC5P28715 1186 aaPredicted RBP12.4□□□□□ -0.42
SAMM50-205ENST00000493621 NSFP46459 744 aaKnown RBP12.4□□□□□ -0.42
SAMM50-205ENST00000493621 KLK7P49862 253 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 KIAA1024LP59773 190 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 POLR2FP61218 127 aaKnown RBP12.4□□□□□ -0.42
SAMM50-205ENST00000493621 CYP4F2P78329 520 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 ARHGEF7Q14155 803 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 TBR1Q16650 682 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 C14orf28Q4W4Y0 310 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 TCP11X2Q5H9J9 407 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 BRAT1Q6PJG6 821 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 WDR59Q6PJI9 974 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 OGFOD3Q6PK18 319 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 TRIM72Q6ZMU5 477 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 ATG14Q6ZNE5 492 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 TMPRSS9Q7Z410 1059 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 CAMK1DQ8IU85 385 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 UMODL1-AS1Q8N2C9 162 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 ZSCAN1Q8NBB4 408 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 FUBP1Q96AE4 644 aaKnown RBP12.4□□□□□ -0.42
SAMM50-205ENST00000493621 TMEM159Q96B96 161 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 ZNF641Q96N77 438 aaPredicted RBP12.4□□□□□ -0.42
SAMM50-205ENST00000493621 PCDHB18PQ96TA0 734 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 CMKLR1Q99788 373 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 TMEM168Q9H0V1 697 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 SEMA6CQ9H3T2 930 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 DPEP2Q9H4A9 486 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 CATSPERBQ9H7T0 1116 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 NLRC4Q9NPP4 1024 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 ADAM22Q9P0K1 906 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 MOSPD1Q9UJG1 213 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 FZD10Q9ULW2 581 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 PCDHB11Q9Y5F2 797 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 PTPN13Q12923 2485 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 SDK2Q58EX2 2172 aa12.4□□□□□ -0.42
SAMM50-205ENST00000493621 C9orf172C9J069 976 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 TERTO14746 1132 aaKnown RBP12.39□□□□□ -0.43
SAMM50-205ENST00000493621 RECQL5O94762 991 aaPredicted RBP12.39□□□□□ -0.43
SAMM50-205ENST00000493621 WT1P19544 449 aaPredicted RBP12.39□□□□□ -0.43
SAMM50-205ENST00000493621 KELP23276 732 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 SOX5P35711 763 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 RGRP47804 291 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 GSCP56915 257 aaPredicted RBP12.39□□□□□ -0.43
SAMM50-205ENST00000493621 RALGDSQ12967 914 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 HLTFQ14527 1009 aaKnown RBP eCLIP12.39□□□□□ -0.43
SAMM50-205ENST00000493621 MAP9Q49MG5 647 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 SPECC1LQ69YQ0 1117 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 SRLQ86TD4 932 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 SLITRK4Q8IW52 837 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 PAF1Q8N7H5 531 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 CCL4L1Q8NHW4 92 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 CELF6Q96J87 481 aaKnown RBP12.39□□□□□ -0.43
SAMM50-205ENST00000493621 TUBGCP5Q96RT8 1024 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 PDFQ9HBH1 243 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 CYP4F12Q9HCS2 524 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 FAM207AQ9NSI2 230 aaPredicted RBP12.39□□□□□ -0.43
SAMM50-205ENST00000493621 DACH1Q9UI36 760 aa12.39□□□□□ -0.43
SAMM50-205ENST00000493621 A0A1W2PQC6 194 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 SIGLEC16A6NMB1 481 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 A8MX80 341 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 FGF10O15520 208 aaPredicted RBP12.38□□□□□ -0.43
SAMM50-205ENST00000493621 SUV39H1O43463 412 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 NUDT21O43809 227 aaKnown RBP12.38□□□□□ -0.43
SAMM50-205ENST00000493621 PRAMEF11O60813 436 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 CALB1P05937 261 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 ELFN1P0C7U0 828 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 SFTPCP11686 197 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 EEF1GP26641 437 aaKnown RBP12.38□□□□□ -0.43
SAMM50-205ENST00000493621 SERPINA4P29622 427 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 ZNF143P52747 638 aaPredicted RBP12.38□□□□□ -0.43
SAMM50-205ENST00000493621 MAZP56270 477 aaKnown RBP12.38□□□□□ -0.43
SAMM50-205ENST00000493621 JAM2P57087 298 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 TPI1P60174 286 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 B4GALNT1Q00973 533 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms