RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	AMZ1	Q400G9	498 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	ZNF672	Q499Z4	452 aa	Predicted RBP	4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	PAPPA-AS1	Q5QFB9	102 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	CUZD1	Q86UP6	607 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	SCCPDH	Q8NBX0	429 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	USP13	Q92995	863 aa	Predicted RBP	4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	KLHL15	Q96M94	604 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	IL17F	Q96PD4	163 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	PSMD1	Q99460	953 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	KXD1	Q9BQD3	176 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	FUZ	Q9BT04	418 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	VPS33B	Q9H267	617 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	MAGEE1	Q9HCI5	957 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	BPIFA1	Q9NP55	256 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	DDX4	Q9NQI0	724 aa	Known RBP	4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	SAGE1	Q9NXZ1	904 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	RCOR1	Q9UKL0	485 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	TBX20	Q9UMR3	447 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	LSM4	Q9Y4Z0	139 aa	Known RBP	4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	ATXN2	Q99700	1313 aa	Known RBP	4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	SOCS6	O14544	535 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	TSPAN4	O14817	238 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	NCAM2	O15394	837 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	TPD52L2	O43399	206 aa	Known RBP	4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	GAGE7	O76087	117 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	PMS2P2	O95744	297 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	MT-CYB	P00156	380 aa	Predicted RBP	4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	MMP2	P08253	660 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	GAGE12F	P0CL80	117 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	GAGE12G	P0CL81	117 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	GAGE12I	P0CL82	117 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	G6PD	P11413	515 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	COX7A2	P14406	83 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	CD58	P19256	250 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	AGA	P20933	346 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	POU3F1	Q03052	451 aa	Predicted RBP	4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	GAGE1	Q13065	139 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	GAGE4	Q13068	117 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	TCTN1	Q2MV58	587 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	SLC9B1	Q4ZJI4	515 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	WBP2NL	Q6ICG8	309 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	WDR73	Q6P4I2	378 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	LCTL	Q6UWM7	567 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	AGBL3	Q8NEM8	1001 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	ZCCHC10	Q8TBK6	192 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	MORC4	Q8TE76	937 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	RND1	Q92730	232 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	VEZT	Q9HBM0	779 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	TXLNG	Q9NUQ3	528 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	DONSON	Q9NYP3	566 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	SMARCAL1	Q9NZC9	954 aa		4.24	□□□□□ -1.73
PHC3-212	ENST00000490723	HNRNPCL2	B2RXH8	293 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	PRAC2	D3DTV9	90 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	HOXC11	O43248	304 aa	Predicted RBP	4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	TF	P02787	698 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	IRF1	P10914	325 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	EIF2S3	P41091	472 aa	Known RBP	4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	PAFAH1B1	P43034	410 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	VAMP2	P63027	116 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	RNPS1	Q15287	305 aa	Known RBP	4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	ATP13A5	Q4VNC0	1218 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	SGO1	Q5FBB7	561 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	NAA35	Q5VZE5	725 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	SLC35F3	Q8IY50	421 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	DSEL	Q8IZU8	1212 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	POC1A	Q8NBT0	407 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	BEST2	Q8NFU1	509 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	HTRA1	Q92743	480 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	ZNF385A	Q96PM9	386 aa	Known RBP	4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	PKP4	Q99569	1192 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	CNGB3	Q9NQW8	809 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	KCNG2	Q9UJ96	466 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	KCNS2	Q9ULS6	477 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	PCDHAC2	Q9Y5I4	1007 aa		4.23	□□□□□ -1.73
PHC3-212	ENST00000490723	SNAP23	O00161	211 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	TULP2	O00295	520 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	PLRG1	O43660	514 aa	Known RBP	4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	CYC1	P08574	325 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	F7	P08709	466 aa	Predicted RBP	4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	LINC00271	P0C7V0	271 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	XBP1	P17861	261 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	SHMT1	P34896	483 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	DLX5	P56178	289 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	NLRP5	P59047	1200 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	SORD	Q00796	357 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	HYAL1	Q12794	435 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	ZNF155	Q12901	538 aa	Predicted RBP	4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	TNFAIP1	Q13829	316 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	OASL	Q15646	514 aa	Known RBP	4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	C9orf50	Q5SZB4	431 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	FAM69A	Q5T7M9	428 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	TXNDC8	Q6A555	127 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	HIST2H2BC	Q6DN03	193 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	HIST2H2BD	Q6DRA6	164 aa		4.22	□□□□□ -1.73
PHC3-212	ENST00000490723	ANKRD54	Q6NXT1	300 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms