RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 FBRSL1Q9HCM7 1045 aaKnown RBP4.05□□□□□ -1.76
CD46-216ENST00000490278 DDX4Q9NQI0 724 aaKnown RBP4.05□□□□□ -1.76
CD46-216ENST00000490278 HIF1ANQ9NWT6 349 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 PLK2Q9NYY3 685 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 CISD1Q9NZ45 108 aaKnown RBP4.05□□□□□ -1.76
CD46-216ENST00000490278 EHD2Q9NZN4 543 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 DLGAP2Q9P1A6 1054 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 SLCO3A1Q9UIG8 710 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 INSL5Q9Y5Q6 135 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 FAM237BA0A1B0GVD1 139 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 A0A1B0GVT2 93 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 A0A1W2PQF6 199 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 MYMKA6NI61 221 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 CD8B2A6NJW9 211 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 OR6C75A6NL08 312 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 INAFM1C9JVW0 142 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 TIPRLO75663 272 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 EIF2S1P05198 315 aaKnown RBP4.04□□□□□ -1.76
CD46-216ENST00000490278 KRT10P13645 584 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 CDH2P19022 906 aaPredicted RBP4.04□□□□□ -1.76
CD46-216ENST00000490278 CD58P19256 250 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 GPTP24298 496 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 NUDT6P53370 316 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 CSTF3Q12996 717 aaKnown RBP4.04□□□□□ -1.76
CD46-216ENST00000490278 OLIG2Q13516 323 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 CTTNQ14247 550 aaKnown RBP4.04□□□□□ -1.76
CD46-216ENST00000490278 NEDD9Q14511 834 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 HNF4GQ14541 408 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 DRAP1Q14919 205 aaPredicted RBP4.04□□□□□ -1.76
CD46-216ENST00000490278 SHBQ15464 509 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 COL28A1Q2UY09 1125 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 SLC45A4Q5BKX6 768 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 NCEH1Q6PIU2 408 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 FBXO46Q6PJ61 603 aaPredicted RBP4.04□□□□□ -1.76
CD46-216ENST00000490278 CYP20A1Q6UW02 462 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 LINGO2Q7L985 606 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 ZBTB2Q8N680 514 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 SCCPDHQ8NBX0 429 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 HUS1BQ8NHY5 278 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 ARRDC2Q8TBH0 407 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 USP6NLQ92738 828 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 ARHGEF2Q92974 986 aaKnown RBP4.04□□□□□ -1.76
CD46-216ENST00000490278 MMABQ96EY8 250 aaPredicted RBP4.04□□□□□ -1.76
CD46-216ENST00000490278 SF3B5Q9BWJ5 86 aaKnown RBP4.04□□□□□ -1.76
CD46-216ENST00000490278 DCLK3Q9C098 648 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 EIF2B3Q9NR50 452 aaKnown RBP4.04□□□□□ -1.76
CD46-216ENST00000490278 MAP3K20Q9NYL2 800 aaKnown RBP4.04□□□□□ -1.76
CD46-216ENST00000490278 OR6C3Q9NZP0 311 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 ABI3Q9P2A4 366 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 CORO1CQ9ULV4 474 aaPredicted RBP4.04□□□□□ -1.76
CD46-216ENST00000490278 PAM16Q9Y3D7 125 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 ADAM18Q9Y3Q7 739 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 PTGDR2Q9Y5Y4 395 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 LYVE1Q9Y5Y7 322 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 RUSC2Q8N2Y8 1516 aa4.04□□□□□ -1.76
CD46-216ENST00000490278 A0A1B0GVM2 712 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 FSD2A1L4K1 749 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 ANKRD18BA2A2Z9 1011 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 FAM90A10PA6NDY2 464 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 LIPT2A6NK58 231 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 PTP4A3O75365 173 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 OAZ2O95190 189 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 IPO7O95373 1038 aaKnown RBP4.03□□□□□ -1.76
CD46-216ENST00000490278 VNN2O95498 520 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 BMP15O95972 392 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 IGKV2-30P06310 120 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 CDC25AP30304 524 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 MAPK4P31152 587 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 HOXD3P31249 432 aaPredicted RBP4.03□□□□□ -1.76
CD46-216ENST00000490278 MLH1P40692 756 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 SORDQ00796 357 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 CEBPZQ03701 1054 aaKnown RBP4.03□□□□□ -1.76
CD46-216ENST00000490278 NAE1Q13564 534 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 USP41Q3LFD5 358 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 ZNF260Q3ZCT1 412 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 C6orf141Q5SZD1 244 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 ITPRIPL1Q6GPH6 555 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 TTI2Q6NXR4 508 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 QSOX2Q6ZRP7 698 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 CCDC129Q6ZRS4 1044 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 IKBIPQ70UQ0 350 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 SHFQ7M4L6 423 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 ARHGAP12Q8IWW6 846 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 AADATQ8N5Z0 425 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 AGBL3Q8NEM8 1001 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 CREB3L4Q8TEY5 395 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 SCARB1Q8WTV0 552 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 ASB5Q8WWX0 329 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 POMGNT1Q8WZA1 660 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 ERGIC1Q969X5 290 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 SLC41A2Q96JW4 573 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 WDFY2Q96P53 400 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 BARD1Q99728 777 aaKnown RBP4.03□□□□□ -1.76
CD46-216ENST00000490278 FAM110AQ9BQ89 295 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 POLR1BQ9H9Y6 1135 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 HCFC1R1Q9NWW0 138 aa4.03□□□□□ -1.76
CD46-216ENST00000490278 FBXO9Q9UK97 447 aaPredicted RBP4.03□□□□□ -1.76
CD46-216ENST00000490278 IGHV4-28A0A0C4DH34 117 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 FAM237AA0A1B0GTK4 181 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 TMEM202A6NGA9 273 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms