RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 UBA2Q9UBT2 640 aaPredicted RBP17.08■□□□□ 0.32
TOP3B-217ENST00000489581 APPL1Q9UKG1 709 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 DGKBQ9Y6T7 804 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 RNF215Q9Y6U7 377 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 BSNQ9UPA5 3926 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 B4DGG1 531 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 WT1P19544 449 aaPredicted RBP17.07■□□□□ 0.32
TOP3B-217ENST00000489581 GPD1P21695 349 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 MMP12P39900 470 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 CYP4F2P78329 520 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 PTP4A2Q12974 167 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 ARHGEF7Q14155 803 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 AGERQ15109 404 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 DPCR1Q3MIW9 517 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 EFHC2Q5JST6 749 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 CERCAMQ5T4B2 595 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 PHF19Q5T6S3 580 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 ATG14Q6ZNE5 492 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 SPRED1Q7Z699 444 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 ZSWIM9Q86XI8 627 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 OR56A4Q8NGH8 313 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 CCL4L1Q8NHW4 92 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 CMKLR1Q99788 373 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 SELENOOQ9BVL4 669 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 TMEM168Q9H0V1 697 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 GANQ9H2C0 597 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 DPEP2Q9H4A9 486 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 FGF22Q9HCT0 170 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 SAMSN1Q9NSI8 373 aaKnown RBP17.07■□□□□ 0.32
TOP3B-217ENST00000489581 MOSPD1Q9UJG1 213 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 ATP8A1Q9Y2Q0 1164 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 PCDHGA4Q9Y5G9 962 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 NBASA2RRP1 2371 aa17.07■□□□□ 0.32
TOP3B-217ENST00000489581 C9orf172C9J069 976 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 J3KR12 359 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 CACNB4O00305 520 aaPredicted RBP17.06■□□□□ 0.32
TOP3B-217ENST00000489581 TERTO14746 1132 aaKnown RBP17.06■□□□□ 0.32
TOP3B-217ENST00000489581 KLK7P49862 253 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 POLR2FP61218 127 aaKnown RBP17.06■□□□□ 0.32
TOP3B-217ENST00000489581 UBE2HP62256 183 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 GRM3Q14832 879 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 TBR1Q16650 682 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 PARP15Q460N3 678 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 C14orf28Q4W4Y0 310 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 BRAT1Q6PJG6 821 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 UMODL1-AS1Q8N2C9 162 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 ZSCAN1Q8NBB4 408 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 FUBP1Q96AE4 644 aaKnown RBP17.06■□□□□ 0.32
TOP3B-217ENST00000489581 TMEM159Q96B96 161 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 ZNF641Q96N77 438 aaPredicted RBP17.06■□□□□ 0.32
TOP3B-217ENST00000489581 PCDHB18PQ96TA0 734 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 SEMA6CQ9H3T2 930 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 CATSPERBQ9H7T0 1116 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 NLRC4Q9NPP4 1024 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 ADAM22Q9P0K1 906 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 FZD10Q9ULW2 581 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 PCDHB11Q9Y5F2 797 aa17.06■□□□□ 0.32
TOP3B-217ENST00000489581 ZFC3H1O60293 1989 aaKnown RBP17.06■□□□□ 0.32
TOP3B-217ENST00000489581 WASH4PA8MWX3 477 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 CCP110O43303 1012 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 SUV39H1O43463 412 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 RECQL5O94762 991 aaPredicted RBP17.05■□□□□ 0.32
TOP3B-217ENST00000489581 UNGP13051 313 aaPredicted RBP17.05■□□□□ 0.32
TOP3B-217ENST00000489581 PNLIPP16233 465 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 SOX5P35711 763 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 RGRP47804 291 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 KIAA1024LP59773 190 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 HLTFQ14527 1009 aaKnown RBP eCLIP17.05■□□□□ 0.32
TOP3B-217ENST00000489581 TCP11X2Q5H9J9 407 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 SPECC1LQ69YQ0 1117 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 DTX1Q86Y01 620 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 SLITRK4Q8IW52 837 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 HTR3CQ8WXA8 447 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 JPH3Q8WXH2 748 aaPredicted RBP17.05■□□□□ 0.32
TOP3B-217ENST00000489581 CELF6Q96J87 481 aaKnown RBP17.05■□□□□ 0.32
TOP3B-217ENST00000489581 RDH14Q9HBH5 336 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 CYP4F12Q9HCS2 524 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 TAB2Q9NYJ8 693 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 COL12A1Q99715 3063 aa17.05■□□□□ 0.32
TOP3B-217ENST00000489581 A0A1W2PQC6 194 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 SIGLEC16A6NMB1 481 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 B4GAT1O43505 415 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 SFTPCP11686 197 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 ERCC5P28715 1186 aaPredicted RBP17.04■□□□□ 0.32
TOP3B-217ENST00000489581 NSFP46459 744 aaKnown RBP17.04■□□□□ 0.32
TOP3B-217ENST00000489581 B4GALNT1Q00973 533 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 RALGDSQ12967 914 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 C16orf72Q14CZ0 275 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 AMZ1Q400G9 498 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 MAP9Q49MG5 647 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 LIPIQ6XZB0 460 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 TRIM72Q6ZMU5 477 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 SRLQ86TD4 932 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 PIM3Q86V86 326 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 TUBGCP5Q96RT8 1024 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 LGR4Q9BXB1 951 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 SUDS3Q9H7L9 328 aaPredicted RBP17.04■□□□□ 0.32
TOP3B-217ENST00000489581 PDFQ9HBH1 243 aa17.04■□□□□ 0.32
TOP3B-217ENST00000489581 FAM207AQ9NSI2 230 aaPredicted RBP17.04■□□□□ 0.32
TOP3B-217ENST00000489581 CFAP69A5D8W1 941 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms