RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 UGP2Q16851 508 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 FBXL19Q6PCT2 694 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 Q6ZS52 159 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 SYT13Q7L8C5 426 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 NLRP9Q7RTR0 991 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 PALM2Q8IXS6 379 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 AGGF1Q8N302 714 aaeCLIP18.29■□□□□ 0.52
C9orf16-203ENST00000489240 EDAQ92838 391 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 ARRDC3Q96B67 414 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 ERLEC1Q96DZ1 483 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 C9orf72Q96LT7 481 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 CDC42EP4Q9H3Q1 356 aaKnown RBP18.29■□□□□ 0.52
C9orf16-203ENST00000489240 MRM3Q9HC36 420 aaKnown RBP18.29■□□□□ 0.52
C9orf16-203ENST00000489240 CD248Q9HCU0 757 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 POLMQ9NP87 494 aaPredicted RBP18.29■□□□□ 0.52
C9orf16-203ENST00000489240 SCML1Q9UN30 329 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 SOX13Q9UN79 622 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 TCAF1Q9Y4C2 921 aa18.29■□□□□ 0.52
C9orf16-203ENST00000489240 FAM237BA0A1B0GVD1 139 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 TTC4O95801 387 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 POLBP06746 335 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 GSTA2P09210 222 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 PIRTP0C851 137 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 CYP2A6P11509 494 aaPredicted RBP18.28■□□□□ 0.52
C9orf16-203ENST00000489240 TIMP2P16035 220 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 TSHRP16473 764 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 PGAM1P18669 254 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 ABL2P42684 1182 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 NEK3P51956 506 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 RPS14P62263 151 aaKnown RBP18.28■□□□□ 0.52
C9orf16-203ENST00000489240 PDE1BQ01064 536 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 ZBTB16Q05516 673 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 SFSWAPQ12872 951 aaKnown RBP18.28■□□□□ 0.52
C9orf16-203ENST00000489240 TAF1AQ15573 450 aaPredicted RBP18.28■□□□□ 0.52
C9orf16-203ENST00000489240 CRY1Q16526 586 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 POM121L1PQ3SYA9 428 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 SPDYCQ5MJ68 293 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 ERAP2Q6P179 960 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 PKN3Q6P5Z2 889 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 FBXO38Q6PIJ6 1188 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 PARS2Q7L3T8 475 aaKnown RBP18.28■□□□□ 0.52
C9orf16-203ENST00000489240 GLT6D1Q7Z4J2 308 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 TTC7BQ86TV6 843 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 IGDCC3Q8IVU1 814 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 MREGQ8N565 214 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 CLDN23Q96B33 292 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 MCCC1Q96RQ3 725 aaPredicted RBP18.28■□□□□ 0.52
C9orf16-203ENST00000489240 LYSMD1Q96S90 227 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 UHRF1Q96T88 793 aaPredicted RBP18.28■□□□□ 0.52
C9orf16-203ENST00000489240 KIFC1Q9BW19 673 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 HDAC8Q9BY41 377 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 MFSD1Q9H3U5 465 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 NINJ2Q9NZG7 142 aa18.28■□□□□ 0.52
C9orf16-203ENST00000489240 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.28■□□□□ 0.52
C9orf16-203ENST00000489240 ZNF106Q9H2Y7 1883 aaKnown RBP18.28■□□□□ 0.52
C9orf16-203ENST00000489240 LRRK1Q38SD2 2015 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 C2orf81A6NN90 581 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 SPAG6O75602 509 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 DNTTP04053 509 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 ALPIP09923 528 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 C7P10643 843 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 PHBP35232 272 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 HNF1BP35680 557 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 RPS9P46781 194 aaKnown RBP18.27■□□□□ 0.52
C9orf16-203ENST00000489240 DGKEP52429 567 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 ELP6Q0PNE2 266 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 KYNUQ16719 465 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 SPANXN3Q5MJ09 141 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 BEND6Q5SZJ8 279 aaPredicted RBP18.27■□□□□ 0.52
C9orf16-203ENST00000489240 TMEM92Q6UXU6 159 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 TRIM67Q6ZTA4 783 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 ERN2Q76MJ5 926 aaKnown RBP18.27■□□□□ 0.52
C9orf16-203ENST00000489240 TMPRSS6Q8IU80 811 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 UBLCP1Q8WVY7 318 aaPredicted RBP18.27■□□□□ 0.52
C9orf16-203ENST00000489240 PEX13Q92968 403 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 RAB7BQ96AH8 199 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 CFAP36Q96G28 342 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 WDR83Q9BRX9 315 aaKnown RBP18.27■□□□□ 0.52
C9orf16-203ENST00000489240 GPR63Q9BZJ6 419 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 PABPC3Q9H361 631 aaKnown RBP18.27■□□□□ 0.52
C9orf16-203ENST00000489240 SEMA4AQ9H3S1 761 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 CHRAC1Q9NRG0 131 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 RIMKLBQ9ULI2 386 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 SIT1Q9Y3P8 196 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 ZNF711Q9Y462 761 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 SPO11Q9Y5K1 396 aa18.27■□□□□ 0.52
C9orf16-203ENST00000489240 MID1O15344 667 aa18.26■□□□□ 0.51
C9orf16-203ENST00000489240 DCXO43602 365 aa18.26■□□□□ 0.51
C9orf16-203ENST00000489240 LDB2O43679 373 aa18.26■□□□□ 0.51
C9orf16-203ENST00000489240 USP1O94782 785 aa18.26■□□□□ 0.51
C9orf16-203ENST00000489240 PAPSS2O95340 614 aaPredicted RBP18.26■□□□□ 0.51
C9orf16-203ENST00000489240 PRKCGP05129 697 aa18.26■□□□□ 0.51
C9orf16-203ENST00000489240 ADRB3P13945 408 aa18.26■□□□□ 0.51
C9orf16-203ENST00000489240 LPOP22079 712 aaPredicted RBP18.26■□□□□ 0.51
C9orf16-203ENST00000489240 MAGEA9P43362 315 aa18.26■□□□□ 0.51
C9orf16-203ENST00000489240 FAM193AP78312 1265 aa18.26■□□□□ 0.51
C9orf16-203ENST00000489240 TTC31Q49AM3 519 aaPredicted RBP18.26■□□□□ 0.51
C9orf16-203ENST00000489240 TSTD2Q5T7W7 516 aa18.26■□□□□ 0.51
C9orf16-203ENST00000489240 TMEM135Q86UB9 458 aa18.26■□□□□ 0.51
C9orf16-203ENST00000489240 MDGA1Q8NFP4 955 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 443 ms