RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 ART5Q96L15 291 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 OPRPNQ99935 248 aaPredicted RBP2.61□□□□□ -1.99
CCDC93-209ENST00000488908 TMEM30AQ9NV96 361 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 ZNF624Q9P2J8 865 aaPredicted RBP2.61□□□□□ -1.99
CCDC93-209ENST00000488908 CNPY2Q9Y2B0 182 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 PCDHGB5Q9Y5G0 923 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 MEIOCA2RUB1 952 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 SMIM1B2RUZ4 78 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 PSMD14O00487 310 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 APAF1O14727 1248 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 ARHGEF9O43307 516 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 MTA2O94776 668 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 ADAP00813 363 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 ITGA2P17301 1181 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 CD58P19256 250 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 SEC61BP60468 96 aaKnown RBP2.6□□□□□ -1.99
CCDC93-209ENST00000488908 TBL3Q12788 808 aaKnown RBP2.6□□□□□ -1.99
CCDC93-209ENST00000488908 PDCLQ13371 301 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 PTK2BQ14289 1009 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 NEDD9Q14511 834 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 LONRF1Q17RB8 773 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 CES5AQ6NT32 575 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 GJB7Q6PEY0 223 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 ATF7IPQ6VMQ6 1270 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 B3GNT6Q6ZMB0 384 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 C15orf39Q6ZRI6 1047 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 C11orf96Q7Z7L8 435 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 LURAP1LQ8IV03 231 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 HERC6Q8IVU3 1022 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 WDR63Q8IWG1 891 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 ZNF440Q8IYI8 595 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 SCAMP5Q8TAC9 235 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 TMEM190Q8WZ59 177 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 TM9SF4Q92544 642 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 ZNF653Q96CK0 615 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 ZNF354BQ96LW1 612 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 MYD88Q99836 296 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 ERVMER34-1Q9H9K5 563 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 CHST12Q9NRB3 414 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 ZDHHC18Q9NUE0 388 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.6□□□□□ -1.99
CCDC93-209ENST00000488908 PADI1Q9ULC6 663 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 AMDHD2Q9Y303 409 aa2.6□□□□□ -1.99
CCDC93-209ENST00000488908 GOLGA6L3A6NEY3 463 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 FAM90A20PA6NIJ5 464 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 SRD5A1P18405 259 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 CHATP28329 748 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 CTF1Q16619 201 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 SOWAHAQ2M3V2 549 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 ESCO2Q56NI9 601 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 STXBP5Q5T5C0 1151 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 KLHL17Q6TDP4 642 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 CHD1LQ86WJ1 897 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 APLFQ8IW19 511 aaPredicted RBP2.59□□□□□ -1.99
CCDC93-209ENST00000488908 CCDC117Q8IWD4 279 aaPredicted RBP2.59□□□□□ -1.99
CCDC93-209ENST00000488908 RNF113BQ8IZP6 322 aaKnown RBP2.59□□□□□ -1.99
CCDC93-209ENST00000488908 PARP16Q8N5Y8 322 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 PPM1EQ8WY54 764 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 ABTB1Q969K4 478 aaPredicted RBP2.59□□□□□ -1.99
CCDC93-209ENST00000488908 ST6GAL2Q96JF0 529 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 CCDC138Q96M89 665 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 NPLQ9BXD5 320 aaPredicted RBP2.59□□□□□ -1.99
CCDC93-209ENST00000488908 HDAC6Q9UBN7 1215 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 KCND3Q9UK17 655 aa2.59□□□□□ -1.99
CCDC93-209ENST00000488908 COL5A2P05997 1499 aaPredicted RBP2.58□□□□□ -2
CCDC93-209ENST00000488908 TAF1P21675 1872 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 PRSS56P0CW18 603 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 GNB3P16520 340 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 ZNF8P17098 575 aaPredicted RBP2.58□□□□□ -2
CCDC93-209ENST00000488908 ABCB4P21439 1286 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 S1PR1P21453 382 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 RYKP34925 604 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 DCTP40126 519 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 MMP14P50281 582 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 CLCNKAP51800 687 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 GOLGA8FQ08AF8 430 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 GAGE5Q13069 117 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 GAGE6Q13070 117 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 STARD3Q14849 445 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 FBXO43Q4G163 708 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 SIRPB2Q5JXA9 342 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 CHERPQ8IWX8 916 aaKnown RBP2.58□□□□□ -2
CCDC93-209ENST00000488908 C1orf87Q8N0U7 546 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 STPG4Q8N801 248 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 FGFBP3Q8TAT2 258 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 PARD3BQ8TEW8 1205 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 RND1Q92730 232 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 TAAR8Q969N4 342 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 PABPC3Q9H361 631 aaKnown RBP2.58□□□□□ -2
CCDC93-209ENST00000488908 UPF2Q9HAU5 1272 aaKnown RBP2.58□□□□□ -2
CCDC93-209ENST00000488908 PLEKHA2Q9HB19 425 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 CNGB3Q9NQW8 809 aa2.58□□□□□ -2
CCDC93-209ENST00000488908 CISD1Q9NZ45 108 aaKnown RBP2.58□□□□□ -2
CCDC93-209ENST00000488908 AGRNO00468 2067 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 WDR1O75083 606 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 SORBS2O94875 1100 aaKnown RBP2.57□□□□□ -2
CCDC93-209ENST00000488908 CSF1P09603 554 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 DPEP1P16444 411 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 TECP42680 631 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 SLC8A3P57103 927 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms