RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 ATMINO43313 823 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-231ENST00000488905 ZIC2O95409 532 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-231ENST00000488905 CCDC172P0C7W6 258 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 PSMA2P25787 234 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 CSNK1DP48730 415 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 KIAA1024LP59773 190 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 RALGDSQ12967 914 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 EIF3IQ13347 325 aaKnown RBP18.53■□□□□ 0.56
HDAC6-231ENST00000488905 STX1AQ16623 288 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 CA9Q16790 459 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 KCTD16Q68DU8 428 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 SRLQ86TD4 932 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 OR6C4Q8NGE1 309 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 TTC9Q92623 222 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 ECHDC3Q96DC8 303 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 RBM15Q96T37 977 aaKnown RBP eCLIP18.53■□□□□ 0.56
HDAC6-231ENST00000488905 EIF3CQ99613 913 aaKnown RBP18.53■□□□□ 0.56
HDAC6-231ENST00000488905 SNRNP25Q9BV90 132 aaKnown RBP18.53■□□□□ 0.56
HDAC6-231ENST00000488905 DHX35Q9H5Z1 703 aaKnown RBP18.53■□□□□ 0.56
HDAC6-231ENST00000488905 EPB41L5Q9HCM4 733 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 DGKBQ9Y6T7 804 aa18.53■□□□□ 0.56
HDAC6-231ENST00000488905 ZFC3H1O60293 1989 aaKnown RBP18.52■□□□□ 0.56
HDAC6-231ENST00000488905 CFAP69A5D8W1 941 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 LRRC10BA6NIK2 292 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 K7ENP7 123 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 PALMO75781 387 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 RPLP0P05388 317 aaKnown RBP18.52■□□□□ 0.56
HDAC6-231ENST00000488905 ELFN1P0C7U0 828 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 CLN3Q13286 438 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 MAMLD1Q13495 774 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 AFMIDQ63HM1 303 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 PPP1R2P3Q6NXS1 205 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 INO80CQ6PI98 192 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-231ENST00000488905 SASS6Q6UVJ0 657 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 RFX8Q6ZV50 586 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 ARHGAP12Q8IWW6 846 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 PLA2G15Q8NCC3 412 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 PEBP4Q96S96 227 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 KCTD15Q96SI1 283 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-231ENST00000488905 SYT11Q9BT88 431 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 CINPQ9BW66 212 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-231ENST00000488905 STRADBQ9C0K7 418 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 HSD3B7Q9H2F3 369 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 SP110Q9HB58 689 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 PARVAQ9NVD7 372 aa18.52■□□□□ 0.56
HDAC6-231ENST00000488905 A0A1W2PQM1 296 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 CACNB4O00305 520 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-231ENST00000488905 RECQL5O94762 991 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-231ENST00000488905 TNFP01375 233 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 CDK11BP21127 795 aaKnown RBP18.51■□□□□ 0.55
HDAC6-231ENST00000488905 CCL7P80098 99 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 BCL2L1Q07817 233 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 ERMARDQ5T6L9 678 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 PLEKHA7Q6IQ23 1121 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 IRF2BP2Q7Z5L9 587 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 NPWQ8N729 165 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 GPR156Q8NFN8 814 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 OR56A4Q8NGH8 313 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 OR1E3Q8WZA6 343 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 FUBP1Q96AE4 644 aaKnown RBP18.51■□□□□ 0.55
HDAC6-231ENST00000488905 FOXP3Q9BZS1 431 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 SEMA4CQ9C0C4 833 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 FGF22Q9HCT0 170 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.51■□□□□ 0.55
HDAC6-231ENST00000488905 PCSK1NQ9UHG2 260 aa18.51■□□□□ 0.55
HDAC6-231ENST00000488905 TMEM202A6NGA9 273 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 TMCO5BA8MYB1 307 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 TMX2-CTNND1H3BSU7 103 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 DFFAO00273 331 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 DAPK3O43293 454 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 ERCC2P18074 760 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 CCKBRP32239 447 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 UGT1A5P35504 534 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 INHBCP55103 352 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 LY6DQ14210 128 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 RFTN1Q14699 578 aaPredicted RBP18.5■□□□□ 0.55
HDAC6-231ENST00000488905 NCAPHQ15003 741 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 ZSCAN23Q3MJ62 389 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 LIPIQ6XZB0 460 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 CCDC81Q6ZN84 652 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 ARHGAP36Q6ZRI8 547 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 CYP4V2Q6ZWL3 525 aaPredicted RBP18.5■□□□□ 0.55
HDAC6-231ENST00000488905 DPPA4Q7L190 304 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 RAB11FIP2Q7L804 512 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 CCNJLQ8IV13 435 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 FBXO39Q8N4B4 442 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 ARFGAP1Q8N6T3 406 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 PAF1Q8N7H5 531 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 LRRN3Q9H3W5 708 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 MYO6Q9UM54 1294 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 PCDHGA7Q9Y5G6 932 aa18.5■□□□□ 0.55
HDAC6-231ENST00000488905 TRAFD1O14545 582 aaPredicted RBP18.49■□□□□ 0.55
HDAC6-231ENST00000488905 ATP1A3P13637 1013 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 GM2AP17900 193 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 TNFAIP3P21580 790 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 KELP23276 732 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 AP1S1P61966 158 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 IL10RBQ08334 325 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 NSUN2Q08J23 767 aaKnown RBP eCLIP18.49■□□□□ 0.55
HDAC6-231ENST00000488905 PPP6R3Q5H9R7 873 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms