RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	PLA2G15	Q8NCC3	412 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	OR6C4	Q8NGE1	309 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	SLC30A5	Q8TAD4	765 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	HCAR2	Q8TDS4	363 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	FAM172A	Q8WUF8	416 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	FUBP1	Q96AE4	644 aa	Known RBP	11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	HMCES	Q96FZ2	354 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	EXOC2	Q96KP1	924 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	WDR92	Q96MX6	357 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	TMEM74	Q96NL1	305 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	C11orf70	Q9BRQ4	267 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	STK33	Q9BYT3	514 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	STRADB	Q9C0K7	418 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	PCDH12	Q9NPG4	1184 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	FOXJ2	Q9P0K8	574 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	KL	Q9UEF7	1012 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	IL17B	Q9UHF5	180 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	APPL1	Q9UKG1	709 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	LOXL2	Q9Y4K0	774 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	DGKB	Q9Y6T7	804 aa		11.44	□□□□□ -0.58
SNU13-208	ENST00000488571	TLN1	Q9Y490	2541 aa	Known RBP	11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	RASA4B	C9J798	803 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	TMX2-CTNND1	H3BSU7	103 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	AGRP	O00253	132 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	RASA4	O43374	803 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	JMJD7	P0C870	316 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	GLB1	P16278	677 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	HTR1B	P28222	390 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	RFC1	P35251	1148 aa	Predicted RBP	11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	MMP12	P39900	470 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	LIG3	P49916	1009 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	CDR2	Q01850	454 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	ELP6	Q0PNE2	266 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	MTM1	Q13496	603 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	SERINC3	Q13530	473 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	TPD52L1	Q16890	204 aa	Predicted RBP	11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	CERCAM	Q5T4B2	595 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	XKR5	Q6UX68	686 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	SPRED1	Q7Z699	444 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	VASH2	Q86V25	355 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	ZFAND4	Q86XD8	727 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	ZNF677	Q86XU0	584 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	DTX1	Q86Y01	620 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	ZNF354C	Q86Y25	554 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	CCNJL	Q8IV13	435 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	SLITRK4	Q8IW52	837 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	FAM114A1	Q8IWE2	563 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	OR1E3	Q8WZA6	343 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	FAM117A	Q9C073	453 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	GAN	Q9H2C0	597 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	PDF	Q9HBH1	243 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	SLC24A3	Q9HC58	644 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	PTPN13	Q12923	2485 aa		11.43	□□□□□ -0.58
SNU13-208	ENST00000488571	TMEM202	A6NGA9	273 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	WASH4P	A8MWX3	477 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	RNF223	E7ERA6	249 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	BUB1B	O60566	1050 aa	Predicted RBP	11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	GFPT2	O94808	682 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	TNF	P01375	233 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	PRKCG	P05129	697 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	PCCB	P05166	539 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	FAM87A	P0C7U9	286 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	UNG	P13051	313 aa	Predicted RBP	11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	XPA	P23025	273 aa	Predicted RBP	11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	EPHB2	P29323	1055 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	GSC	P56915	257 aa	Predicted RBP	11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	YBEY	P58557	167 aa	Predicted RBP	11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	RALGDS	Q12967	914 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	DPCR1	Q3MIW9	517 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	WDR59	Q6PJI9	974 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	SLFN11	Q7Z7L1	901 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	DNAAF5	Q86Y56	855 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	CAMK1D	Q8IU85	385 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	UMODL1-AS1	Q8N2C9	162 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	HTR3C	Q8WXA8	447 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	PCDHB18P	Q96TA0	734 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	SUV39H2	Q9H5I1	410 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	FGF22	Q9HCT0	170 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	MRPL40	Q9NQ50	206 aa	Known RBP	11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	DAAM1	Q9Y4D1	1078 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	RNF215	Q9Y6U7	377 aa		11.42	□□□□□ -0.58
SNU13-208	ENST00000488571	COL12A1	Q99715	3063 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	C9orf172	C9J069	976 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571		J3KR12	359 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	PES1	O00541	588 aa	Known RBP	11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	SUV39H1	O43463	412 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	KRT3	P12035	628 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	PNLIP	P16233	465 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	GM2A	P17900	193 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	GPD1	P21695	349 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	RGR	P47804	291 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	JAM2	P57087	298 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	KIAA1024L	P59773	190 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	CYP4F2	P78329	520 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	B4GALNT1	Q00973	533 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	BECN1	Q14457	450 aa		11.41	□□□□□ -0.58
SNU13-208	ENST00000488571	TBR1	Q16650	682 aa		11.41	□□□□□ -0.58

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