RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 PTAR1Q7Z6K3 402 aaPredicted RBP14.28□□□□□ -0.12
COL9A2-208ENST00000488463 CCDC13Q8IYE1 715 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 KATNAL2Q8IYT4 538 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 LRRC57Q8N9N7 239 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 PIH1D2Q8WWB5 315 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 KRT35Q92764 455 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 CDC6Q99741 560 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 BAG1Q99933 345 aaPredicted RBP14.28□□□□□ -0.12
COL9A2-208ENST00000488463 SEMA3CQ99985 751 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 ASXL3Q9C0F0 2248 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 RBM22Q9NW64 420 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL9A2-208ENST00000488463 UCKL1Q9NWZ5 548 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 B4GALT6Q9UBX8 382 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 PCDHB9Q9Y5E1 797 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 BPTFQ12830 3046 aa14.27□□□□□ -0.12
COL9A2-208ENST00000488463 FAM221BA6H8Z2 402 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 GOLGA6L3A6NEY3 463 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 KCNK1O00180 336 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 APOL1O14791 398 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 SDC3O75056 442 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 PIAS2O75928 621 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 PRLP01236 227 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 MMP2P08253 660 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 PDHA1P08559 390 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 KRT10P13645 584 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 TNNT1P13805 278 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 NME1P15531 152 aaKnown RBP14.27□□□□□ -0.13
COL9A2-208ENST00000488463 SPINK2P20155 84 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 LHCGRP22888 699 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 XPAP23025 273 aaPredicted RBP14.27□□□□□ -0.13
COL9A2-208ENST00000488463 DGKAP23743 735 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 VAV2P52735 878 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 POLR2LP62875 67 aaKnown RBP14.27□□□□□ -0.13
COL9A2-208ENST00000488463 DSC2Q02487 901 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 FOXC1Q12948 553 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 EIF2B5Q13144 721 aaKnown RBP14.27□□□□□ -0.13
COL9A2-208ENST00000488463 IRF4Q15306 451 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 ZFYVE27Q5T4F4 411 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 SPOCD1Q6ZMY3 1216 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 NYAP1Q6ZVC0 841 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 PELI3Q8N2H9 469 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 BBS5Q8N3I7 341 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 PNPLA1Q8N8W4 532 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 SPC24Q8NBT2 197 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 NSMCE1Q8WV22 266 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 ADAMTS14Q8WXS8 1223 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 ANP32BQ92688 251 aaKnown RBP14.27□□□□□ -0.13
COL9A2-208ENST00000488463 FUBP1Q96AE4 644 aaKnown RBP14.27□□□□□ -0.13
COL9A2-208ENST00000488463 COQ10AQ96MF6 247 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 SMIM14Q96QK8 99 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 HERPUD2Q9BSE4 406 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 TMEM121BQ9BXQ6 578 aaPredicted RBP14.27□□□□□ -0.13
COL9A2-208ENST00000488463 POLR1EQ9GZS1 481 aaKnown RBP14.27□□□□□ -0.13
COL9A2-208ENST00000488463 LUC7LQ9NQ29 371 aaKnown RBP14.27□□□□□ -0.13
COL9A2-208ENST00000488463 ANGPTL2Q9UKU9 493 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 HEY1Q9Y5J3 304 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 RAI2Q9Y5P3 530 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 APC2O95996 2303 aa14.27□□□□□ -0.13
COL9A2-208ENST00000488463 hCG_1818297A0A087WSY0 165 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 A0A1W2PQ67 120 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 TRIM38O00635 465 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 TNFSF14O43557 240 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 HYAL3O43820 417 aaPredicted RBP14.26□□□□□ -0.13
COL9A2-208ENST00000488463 RECQL5O94762 991 aaPredicted RBP14.26□□□□□ -0.13
COL9A2-208ENST00000488463 CPP00450 1065 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 JCHAINP01591 159 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 CSF2P04141 144 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 ITGAVP06756 1048 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 PECAM1P16284 738 aaPredicted RBP14.26□□□□□ -0.13
COL9A2-208ENST00000488463 CTNNA1P35221 906 aaKnown RBP14.26□□□□□ -0.13
COL9A2-208ENST00000488463 PEX5P50542 639 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 YPEL5P62699 121 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 PDE1CQ14123 709 aaPredicted RBP14.26□□□□□ -0.13
COL9A2-208ENST00000488463 LRRC14Q15048 493 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 CNGA3Q16281 694 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 PROX2Q3B8N5 592 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 ZNF542PQ5EBM4 170 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 CFAP58Q5T655 872 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 CHCHD4Q8N4Q1 142 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 EID2Q8N6I1 236 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 PLA2G15Q8NCC3 412 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 SCRN2Q96FV2 425 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 SCNM1Q9BWG6 230 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 SAE1Q9UBE0 346 aaPredicted RBP14.26□□□□□ -0.13
COL9A2-208ENST00000488463 PHTF1Q9UMS5 762 aa14.26□□□□□ -0.13
COL9A2-208ENST00000488463 A0A0U1RQS6 177 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 GRID2IPA4D2P6 1211 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 NPIPB15A6NHN6 443 aaPredicted RBP14.25□□□□□ -0.13
COL9A2-208ENST00000488463 A8MX80 341 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 TOR1BO14657 336 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 HEXIM1O94992 359 aaKnown RBP14.25□□□□□ -0.13
COL9A2-208ENST00000488463 TRIM16O95361 564 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 ZFXP17010 805 aaPredicted RBP14.25□□□□□ -0.13
COL9A2-208ENST00000488463 CES1P23141 567 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 VIPR1P32241 457 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 DYNLT1P63172 113 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 SKOR1P84550 965 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 INPP5AQ14642 412 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 PDK1Q15118 436 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 PRKD1Q15139 912 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms