RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 FAM71AQ8IYT1 594 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 CCAR2Q8N163 923 aaKnown RBP6.07□□□□□ -1.44
CDHR3-213ENST00000488386 STK40Q8N2I9 435 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 MINDY1Q8N5J2 469 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 EMC1Q8N766 993 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 ATP6V0D2Q8N8Y2 350 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 SLC30A5Q8TAD4 765 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 FIBINQ8TAL6 211 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 GANCQ8TET4 914 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 WFIKKN2Q8TEU8 576 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 DDX1Q92499 740 aaKnown RBP6.07□□□□□ -1.44
CDHR3-213ENST00000488386 KISS1RQ969F8 398 aaPredicted RBP6.07□□□□□ -1.44
CDHR3-213ENST00000488386 ZNF419Q96HQ0 510 aaPredicted RBP6.07□□□□□ -1.44
CDHR3-213ENST00000488386 CFAP57Q96MR6 1250 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 RPRD1AQ96P16 312 aaPredicted RBP6.07□□□□□ -1.44
CDHR3-213ENST00000488386 PCDHB18PQ96TA0 734 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 TBCBQ99426 244 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 CDC6Q99741 560 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 SLC2A11Q9BYW1 496 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 CAAP1Q9H8G2 361 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 CNTD2Q9H8S5 307 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 ITM2CQ9NQX7 267 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 EIF2B4Q9UI10 523 aaKnown RBP6.07□□□□□ -1.44
CDHR3-213ENST00000488386 PLA2G4CQ9UP65 541 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 ERVW-1Q9UQF0 538 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 TRAF6Q9Y4K3 522 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 ACTL7AQ9Y615 435 aa6.07□□□□□ -1.44
CDHR3-213ENST00000488386 DOCK9Q9BZ29 2069 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 A0A1B0GVT2 93 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 TYW5A2RUC4 315 aaKnown RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 HRKO00198 91 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 ETV2O00321 342 aaPredicted RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 MID1O15344 667 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 SNAP91O60641 907 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 DNTTP04053 509 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 ATP5BP06576 529 aaKnown RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 SERPINF2P08697 491 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 ZNF18P17022 549 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 CHRNB2P17787 502 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 ABCB4P21439 1286 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 GLDCP23378 1020 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 EEF1GP26641 437 aaKnown RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 CCR1P32246 355 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 CSNK1EP49674 416 aaKnown RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 COPB1P53618 953 aaKnown RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 ST8SIA6P61647 398 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 NOMO3P69849 1222 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 SRSF3P84103 164 aaKnown RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 IL9RQ01113 521 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 FMO1Q01740 532 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 BNC1Q01954 994 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 GFPT1Q06210 699 aaPredicted RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 GRIK2Q13002 908 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 SQSTM1Q13501 440 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 SYCP1Q15431 976 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 CDO1Q16878 200 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 C15orf59Q2T9L4 293 aaPredicted RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 ALFQ53S48 1182 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 KCNT1Q5JUK3 1230 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 EFHC1Q5JVL4 640 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 PRAMEF14Q5SWL7 426 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 C9orf64Q5T6V5 341 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 DAB2IPQ5VWQ8 1189 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 CXorf57Q6NSI4 855 aaKnown RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 LINGO4Q6UY18 593 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 CLEC17AQ6ZS10 378 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 RBM43Q6ZSC3 357 aaKnown RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 SLC26A9Q7LBE3 791 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 TFAP2DQ7Z6R9 452 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 ERICH1Q86X53 443 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 FAM131BQ86XD5 332 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 AOPEPQ8N6M6 819 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 NETO2Q8NC67 525 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 TMEM35BQ8NCS4 154 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 JOSD2Q8TAC2 188 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 THAP3Q8WTV1 239 aaPredicted RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 PTPRN2Q92932 1015 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 AZIN2Q96A70 460 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 TTC17Q96AE7 1141 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 MRFAP1L1Q96HT8 127 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 BTN2A3PQ96KV6 586 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 GBP4Q96PP9 640 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 C11orf70Q9BRQ4 267 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 TKTL2Q9H0I9 626 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 HSD3B7Q9H2F3 369 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 EBF2Q9HAK2 575 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 GPR27Q9NS67 375 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 SEPT11Q9NVA2 429 aaKnown RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 MPP6Q9NZW5 540 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 EVLQ9UI08 416 aaPredicted RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 NOCTQ9UK39 431 aaKnown RBP6.06□□□□□ -1.44
CDHR3-213ENST00000488386 SPEGQ15772 3267 aa6.06□□□□□ -1.44
CDHR3-213ENST00000488386 NCOR2Q9Y618 2525 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 A0A0D9SEW6 157 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 TEX51A0A1B0GUA7 166 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 K7ERQ8 282 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 WNT9AO14904 365 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 BCAT2O15382 392 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms