RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 FAM167BQ9BTA0 163 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.96□□□□□ -1.78
CCDC66-221ENST00000487739 SLC32A1Q9H598 525 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 C17orf75Q9HAS0 396 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 NOD2Q9HC29 1040 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 SMYD2Q9NRG4 433 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 CISD1Q9NZ45 108 aaKnown RBP3.96□□□□□ -1.78
CCDC66-221ENST00000487739 C1RLQ9NZP8 487 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 ZNF711Q9Y462 761 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 A0A1W2PS18 150 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 APOHP02749 345 aaPredicted RBP3.95□□□□□ -1.78
CCDC66-221ENST00000487739 MARK3P27448 753 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 ATP12AP54707 1039 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 ERVK11-1P61568 191 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 POSTNQ15063 836 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 IRAK1BP1Q5VVH5 260 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 PLA2G4FQ68DD2 849 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 C17orf99Q6UX52 265 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 SLC9B2Q86UD5 537 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 SPICE1Q8N0Z3 855 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 CIARTQ8N365 385 aaPredicted RBP3.95□□□□□ -1.78
CCDC66-221ENST00000487739 SPPL3Q8TCT6 385 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 CD180Q99467 661 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 KXD1Q9BQD3 176 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 CLSTN3Q9BQT9 956 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 FBRSL1Q9HCM7 1045 aaKnown RBP3.95□□□□□ -1.78
CCDC66-221ENST00000487739 SCRT2Q9NQ03 307 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 ALKBH4Q9NXW9 302 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 FEM1BQ9UK73 627 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 POU2F3Q9UKI9 436 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 NFE2L3Q9Y4A8 694 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 PSAT1Q9Y617 370 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 NOTCH3Q9UM47 2321 aa3.95□□□□□ -1.78
CCDC66-221ENST00000487739 PABPN1LA6NDY0 278 aaKnown RBP3.94□□□□□ -1.78
CCDC66-221ENST00000487739 FAM90A7PA6NKC0 464 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 SH2D7A6NKC9 451 aaPredicted RBP3.94□□□□□ -1.78
CCDC66-221ENST00000487739 FAM90A22PA8MWA6 464 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 FAM90A12PA8MX19 464 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 FAM90A23PA8MXZ1 464 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 LDLRP01130 860 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 CHKAP35790 457 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 RELQ04864 619 aaPredicted RBP3.94□□□□□ -1.78
CCDC66-221ENST00000487739 TBL3Q12788 808 aaKnown RBP3.94□□□□□ -1.78
CCDC66-221ENST00000487739 ANKRD1Q15327 319 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 ANKRD45Q5TZF3 282 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 B3GNT6Q6ZMB0 384 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 MOGAT3Q86VF5 341 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 METTL27Q8N6F8 245 aaPredicted RBP3.94□□□□□ -1.78
CCDC66-221ENST00000487739 USP38Q8NB14 1042 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 SCCPDHQ8NBX0 429 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 DMBX1Q8NFW5 382 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 CTCFLQ8NI51 663 aaPredicted RBP3.94□□□□□ -1.78
CCDC66-221ENST00000487739 MAGEC3Q8TD91 643 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 TRMT61BQ9BVS5 477 aaKnown RBP3.94□□□□□ -1.78
CCDC66-221ENST00000487739 MROH8Q9H579 483 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 KLHL1Q9NR64 748 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 CARD8Q9Y2G2 431 aa3.94□□□□□ -1.78
CCDC66-221ENST00000487739 hCG_1642624A0A1W2PR95 340 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 ANTXRLA6NF34 631 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 B9A039 149 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 AKR1B15C9JRZ8 316 aaPredicted RBP3.93□□□□□ -1.78
CCDC66-221ENST00000487739 KLK8O60259 260 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 CNPP09543 421 aaKnown RBP3.93□□□□□ -1.78
CCDC66-221ENST00000487739 CDH1P12830 882 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 TIMP3P35625 211 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 FMO5P49326 533 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 SEC61BP60468 96 aaKnown RBP3.93□□□□□ -1.78
CCDC66-221ENST00000487739 PITX1P78337 314 aaPredicted RBP3.93□□□□□ -1.78
CCDC66-221ENST00000487739 SLC20A2Q08357 652 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 NAA25Q14CX7 972 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 PDCD2Q16342 344 aaPredicted RBP3.93□□□□□ -1.78
CCDC66-221ENST00000487739 TUBB8Q3ZCM7 444 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 DSG4Q86SJ6 1040 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 NFE4Q86UQ8 179 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 FAM160B2Q86V87 743 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 FTSJ3Q8IY81 847 aaKnown RBP3.93□□□□□ -1.78
CCDC66-221ENST00000487739 KIAA2013Q8IYS2 634 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 DSELQ8IZU8 1212 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 MYCT1Q8N699 235 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 AGBL3Q8NEM8 1001 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 RILPL2Q969X0 211 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 MXRA8Q9BRK3 442 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 C1QTNF5Q9BXJ0 243 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 PCDH9Q9HC56 1237 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 CNGB3Q9NQW8 809 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 MCM9Q9NXL9 1143 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 TAAR2Q9P1P5 351 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 TAGLN3Q9UI15 199 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 MMP24Q9Y5R2 645 aa3.93□□□□□ -1.78
CCDC66-221ENST00000487739 VWA3AA6NCI4 1184 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 ASPDHA6ND91 283 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 CAPN9O14815 690 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 USP8P40818 1118 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 TMPOP42166 694 aaKnown RBP3.92□□□□□ -1.78
CCDC66-221ENST00000487739 CLDN2P57739 230 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 UBE4AQ14139 1066 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 MORC3Q14149 939 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 CTF1Q16619 201 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 MMEL1Q495T6 779 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 EPHX4Q8IUS5 362 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms