RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 PHF19Q5T6S3 580 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 SPECC1LQ69YQ0 1117 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 ZSCAN1Q8NBB4 408 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 JOSD2Q8TAC2 188 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 CPA5Q8WXQ8 436 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 CENPIQ92674 756 aaPredicted RBP15.45■□□□□ 0.06
MCF2L-228ENST00000487354 TBC1D31Q96DN5 1066 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 HMCESQ96FZ2 354 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 NUDT22Q9BRQ3 303 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 NAA15Q9BXJ9 866 aaKnown RBP15.45■□□□□ 0.06
MCF2L-228ENST00000487354 RWDD2AQ9UIY3 292 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 FHOD1Q9Y613 1164 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 ZSCAN5CA6NGD5 496 aaPredicted RBP15.44■□□□□ 0.06
MCF2L-228ENST00000487354 C2CD4BA6NLJ0 364 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 LSM8O95777 96 aaKnown RBP15.44■□□□□ 0.06
MCF2L-228ENST00000487354 TNFP01375 233 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 PLEKP08567 350 aaPredicted RBP15.44■□□□□ 0.06
MCF2L-228ENST00000487354 FGF3P11487 239 aaPredicted RBP15.44■□□□□ 0.06
MCF2L-228ENST00000487354 GP1BBP13224 206 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 LIFP15018 202 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 SUOXP51687 545 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 MAZP56270 477 aaKnown RBP15.44■□□□□ 0.06
MCF2L-228ENST00000487354 KCNAB2Q13303 367 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 IGFBP7Q16270 282 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 MIIPQ5JXC2 388 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 NAA35Q5VZE5 725 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 BORAQ6PGQ7 559 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 TAF8Q7Z7C8 310 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 NRROSQ86YC3 692 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 PYROXD2Q8N2H3 581 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 RCBTB1Q8NDN9 531 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 FAM46DQ8NEK8 389 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 OR56A4Q8NGH8 313 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 GPT2Q8TD30 523 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 HCAR2Q8TDS4 363 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 RXFP2Q8WXD0 754 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 CASKIN2Q8WXE0 1202 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 LGR4Q9BXB1 951 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 PDFQ9HBH1 243 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 HPCAL4Q9UM19 191 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 PCDHB11Q9Y5F2 797 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 PCDHGA3Q9Y5H0 932 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 ST14Q9Y5Y6 855 aa15.44■□□□□ 0.06
MCF2L-228ENST00000487354 IGHV5-10-1A0A0J9YXX1 117 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 STMND1H3BQB6 276 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 FGFR1OPO95684 399 aaKnown RBP15.43■□□□□ 0.06
MCF2L-228ENST00000487354 CPNE6O95741 557 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 NTRK1P04629 796 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 MMEP08473 750 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 PTPN9P43378 593 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 RGRP47804 291 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 OR1D5P58170 312 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 BPIFB4P59827 614 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 RAD51Q06609 339 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 MAP9Q49MG5 647 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 RTL3Q8N8U3 475 aaKnown RBP15.43■□□□□ 0.06
MCF2L-228ENST00000487354 EPS8L1Q8TE68 723 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 SUV39H2Q9H5I1 410 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 SPATS2LQ9NUQ6 558 aaKnown RBP15.43■□□□□ 0.06
MCF2L-228ENST00000487354 ATP8A1Q9Y2Q0 1164 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 DAAM1Q9Y4D1 1078 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 ICE1Q9Y2F5 2266 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 SPTBN1Q01082 2364 aaKnown RBP15.43■□□□□ 0.06
MCF2L-228ENST00000487354 UNC79Q9P2D8 2635 aa15.43■□□□□ 0.06
MCF2L-228ENST00000487354 RASA4BC9J798 803 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 TNFRSF10CO14798 259 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 HGSO14964 777 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-228ENST00000487354 RASA4O43374 803 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 FUCA1P04066 466 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 CSF2RBP32927 897 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 UGT1A3P35503 534 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 TRIM23P36406 574 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 CASRP41180 1078 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 SERINC3Q13530 473 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 STRADAQ7RTN6 431 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 PHLDB2Q86SQ0 1253 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 CREBRFQ8IUR6 639 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 ATL2Q8NHH9 583 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 SLC20A1Q8WUM9 679 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 PTCD2Q8WV60 388 aaKnown RBP15.42■□□□□ 0.06
MCF2L-228ENST00000487354 NTAN1Q96AB6 310 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 CCDC74BQ96LY2 380 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 NSMCE3Q96MG7 304 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 TUBD1Q9UJT1 453 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 NOCTQ9UK39 431 aaKnown RBP15.42■□□□□ 0.06
MCF2L-228ENST00000487354 MAN2B2Q9Y2E5 1009 aa15.42■□□□□ 0.06
MCF2L-228ENST00000487354 RECQL5O94762 991 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-228ENST00000487354 CYP1A1P04798 512 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-228ENST00000487354 HOXC4P09017 264 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-228ENST00000487354 MMP8P22894 467 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 CD1CP29017 333 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 PTP4A2Q12974 167 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 RAPGEF1Q13905 1077 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 ARHGEF7Q14155 803 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 KLHDC7AQ5VTJ3 777 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 LIPIQ6XZB0 460 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 DNAAF5Q86Y56 855 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 CAMK1DQ8IU85 385 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 GPBAR1Q8TDU6 330 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 FAM172AQ8WUF8 416 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms