RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 DTX1Q86Y01 620 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 SLITRK4Q8IW52 837 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 FAM46DQ8NEK8 389 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 FUBP1Q96AE4 644 aaKnown RBP19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 MRPL40Q9NQ50 206 aaKnown RBP19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 LRIT1Q9P2V4 623 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 UBA2Q9UBT2 640 aaPredicted RBP19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 ATP8A1Q9Y2Q0 1164 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 B4DGG1 531 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 SUV39H1O43463 412 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 BUB1BO60566 1050 aaPredicted RBP19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 KRT3P12035 628 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 GPD1P21695 349 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 RFC1P35251 1148 aaPredicted RBP19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 KIAA1024LP59773 190 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 CYP4F2P78329 520 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 HLTFQ14527 1009 aaKnown RBP eCLIP19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 GRM3Q14832 879 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 EFHC2Q5JST6 749 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 CFAP58Q5T655 872 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 BRAT1Q6PJG6 821 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 CAMK1DQ8IU85 385 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 OR56A4Q8NGH8 313 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 HTR3CQ8WXA8 447 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 ZNF641Q96N77 438 aaPredicted RBP19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 SEMA3CQ99985 751 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 GANQ9H2C0 597 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 PDFQ9HBH1 243 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 PCDHB11Q9Y5F2 797 aa19.56■□□□□ 0.72
SMPDL3A-202ENST00000487215 AHCTF1Q8WYP5 2266 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 A0A1W2PQC6 194 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 WASH4PA8MWX3 477 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 CACNB4O00305 520 aaPredicted RBP19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 CREB3O43889 395 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 SFTPCP11686 197 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 RALGDSQ12967 914 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 ARHGEF7Q14155 803 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 DPCR1Q3MIW9 517 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 PHF19Q5T6S3 580 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 WDR59Q6PJI9 974 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 UMODL1-AS1Q8N2C9 162 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 ZSCAN1Q8NBB4 408 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 CCL4L1Q8NHW4 92 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 SELENOOQ9BVL4 669 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 TMEM168Q9H0V1 697 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 SEMA6CQ9H3T2 930 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 BSNQ9UPA5 3926 aa19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 UBR5O95071 2799 aaPredicted RBP19.55■□□□□ 0.72
SMPDL3A-202ENST00000487215 NUDT21O43809 227 aaKnown RBP19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 RECQL5O94762 991 aaPredicted RBP19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 UNGP13051 313 aaPredicted RBP19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 CD82P27701 267 aa19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 GSCP56915 257 aaPredicted RBP19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 C16orf72Q14CZ0 275 aa19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 MAP9Q49MG5 647 aa19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 SPECC1LQ69YQ0 1117 aa19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 SCYL2Q6P3W7 929 aa19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 TRIM72Q6ZMU5 477 aa19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 TUBGCP5Q96RT8 1024 aa19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 PCDHB18PQ96TA0 734 aa19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 DPEP2Q9H4A9 486 aa19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 CATSPERBQ9H7T0 1116 aa19.54■□□□□ 0.72
SMPDL3A-202ENST00000487215 NAV2Q8IVL1 2488 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 SPTA1P02549 2419 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 ANKRD36A6QL64 1941 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 CFAP69A5D8W1 941 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 J3KR12 359 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 CCP110O43303 1012 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 KELP23276 732 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 ERCC5P28715 1186 aaPredicted RBP19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 RGRP47804 291 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 UBE2HP62256 183 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 B4GALNT1Q00973 533 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 CLCA4Q14CN2 919 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 FUCA2Q9BTY2 467 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 LRRC19Q9H756 370 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 RDH14Q9HBH5 336 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 CYP4F12Q9HCS2 524 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 SAMSN1Q9NSI8 373 aaKnown RBP19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 ADAM22Q9P0K1 906 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 FZD10Q9ULW2 581 aa19.53■□□□□ 0.72
SMPDL3A-202ENST00000487215 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 TNFRSF10CO14798 259 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 B4GAT1O43505 415 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 PRAMEF11O60813 436 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 PPFIA2O75334 1257 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 HOXC4P09017 264 aaPredicted RBP19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 GM2AP17900 193 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 SOX5P35711 763 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 NSFP46459 744 aaKnown RBP19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 KLK7P49862 253 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 JAM2P57087 298 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 SRSF1Q07955 248 aaKnown RBP eCLIP19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 LIPIQ6XZB0 460 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 C3orf20Q8ND61 904 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 LGR4Q9BXB1 951 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 B3GNT4Q9C0J1 378 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 TAB2Q9NYJ8 693 aa19.52■□□□□ 0.72
SMPDL3A-202ENST00000487215 FGF10O15520 208 aaPredicted RBP19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 CPNE6O95741 557 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms