RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 TMEM174Q8WUU8 243 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 POMGNT1Q8WZA1 660 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 FAM120BQ96EK7 910 aaKnown RBP5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 TKTL2Q9H0I9 626 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 MAP6D1Q9H9H5 199 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 SMYD2Q9NRG4 433 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 ABI3Q9P2A4 366 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 CNOT8Q9UFF9 292 aaKnown RBP5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 CAMSAP1Q5T5Y3 1602 aa5.15□□□□□ -1.58
PRPF38A-203ENST00000487160 ABCA6Q8N139 1617 aa5.15□□□□□ -1.58
PRPF38A-203ENST00000487160 POLR1AO95602 1720 aaPredicted RBP5.15□□□□□ -1.58
PRPF38A-203ENST00000487160 FAM237AA0A1B0GTK4 181 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 A0A1W2PRG0 241 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 BTBD18B2RXH4 712 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 MASP2O00187 686 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 KLK8O60259 260 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 TMCC2O75069 709 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 OR2C1O95371 312 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 MMP3P08254 477 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 PRR35P0CG20 571 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 CSH1P0DML2 217 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 CSH2P0DML3 217 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 KRT10P13645 584 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 IL7RP16871 459 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 KELP23276 732 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 ACSL1P33121 698 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 SHMT1P34896 483 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 AVPR1AP37288 418 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 UBA7P41226 1012 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 SRSF4Q08170 494 aaKnown RBP5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 NIPAL4Q0D2K0 466 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 CHAF1BQ13112 559 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 OLIG2Q13516 323 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 INPP5JQ15735 1006 aaPredicted RBP5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 SOWAHAQ2M3V2 549 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 ESCO2Q56NI9 601 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 EPHA10Q5JZY3 1008 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 CFAP58Q5T655 872 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 GKAP1Q5VSY0 366 aaPredicted RBP5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 NCAPH2Q6IBW4 605 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 LCTLQ6UWM7 567 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 TICAM2Q86XR7 235 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 CAMK1DQ8IU85 385 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 DENND6AQ8IWF6 608 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 PRSS3P2Q8NHM4 247 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 CALML4Q96GE6 196 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 NPFFR1Q9GZQ6 430 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 SMARCAD1Q9H4L7 1026 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 SH2D4AQ9H788 454 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 MAGEE1Q9HCI5 957 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 BPIFA1Q9NP55 256 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 RRP7BPQ9NSQ0 103 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 ANKEF1Q9NU02 776 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 POLG2Q9UHN1 485 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 PCDHGB4Q9UN71 923 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 AAR2Q9Y312 384 aaKnown RBP5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 A3GALT2U3KPV4 340 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 DIP2CQ9Y2E4 1556 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 UTYO14607 1347 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 MYO3AQ8NEV4 1616 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 ZMYM2Q9UBW7 1377 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 MROH2AA6NES4 1674 aa5.15□□□□□ -1.59
PRPF38A-203ENST00000487160 NCOA1Q15788 1441 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 ATP10AO60312 1499 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 REREQ9P2R6 1566 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 A0A0U1RQF3 1178 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 CGB1A6NKQ9 187 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 TSPAN9O75954 239 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 IPO7O95373 1038 aaKnown RBP5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 HOXB5P09067 269 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 CLTBP09497 229 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 MYZAPP0CAP1 466 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 TFPIP10646 304 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 ETFAP13804 333 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 DCTDP32321 178 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 PSMB10P40306 273 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 F2RL1P55085 397 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 CDH8P55286 799 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 CDH12P55289 794 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 SNX16P57768 344 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 PRAMEP78395 509 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 ITGADQ13349 1161 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 IRF3Q14653 427 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 DRAP1Q14919 205 aaPredicted RBP5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 ARHGEF6Q15052 776 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 TRIP6Q15654 476 aaKnown RBP5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 TCTN1Q2MV58 587 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 C10orf25Q5T742 122 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 FBXO46Q6PJ61 603 aaPredicted RBP5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 SARM1Q6SZW1 724 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 CHST9Q7L1S5 443 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 GALNT5Q7Z7M9 940 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 ADGRF2Q8IZF7 708 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 OR8H2Q8N162 312 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 C17orf53Q8N3J3 647 aaPredicted RBP5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 PARP16Q8N5Y8 322 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 SNAPC3Q92966 411 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 ZKSCAN4Q969J2 545 aaPredicted RBP5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 TMEM18Q96B42 140 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 ERP27Q96DN0 273 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms