RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 BLOC1S4Q9NUP1 217 aa5.06□□□□□ -1.6
LMBR1-218ENST00000486837 RNF7Q9UBF6 113 aa5.06□□□□□ -1.6
LMBR1-218ENST00000486837 CAPN7Q9Y6W3 813 aa5.06□□□□□ -1.6
LMBR1-218ENST00000486837 PIAS3Q9Y6X2 628 aa5.06□□□□□ -1.6
LMBR1-218ENST00000486837 EIF3CLB5ME19 914 aaKnown RBP5.05□□□□□ -1.6
LMBR1-218ENST00000486837 H3BNX3 289 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 I6L893 689 aaPredicted RBP5.05□□□□□ -1.6
LMBR1-218ENST00000486837 SPRY3O43610 288 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 ZBED4O75132 1171 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 NDUFB4O95168 129 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 MMP2P08253 660 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 CBSLP0DN79 551 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 ACADMP11310 421 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 ETFAP13804 333 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 ITGAXP20702 1163 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 CBSP35520 551 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 ANP32AP39687 249 aaKnown RBP5.05□□□□□ -1.6
LMBR1-218ENST00000486837 KCNJ4P48050 445 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 GOLGA8DPQ0D2H9 430 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 TRAF1Q13077 416 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 MAMLD1Q13495 774 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 OLIG2Q13516 323 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 FAM133BQ5BKY9 247 aaKnown RBP5.05□□□□□ -1.6
LMBR1-218ENST00000486837 LRRC8EQ6NSJ5 796 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 Q6ZSV7 163 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 TECPR1Q7Z6L1 1165 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 TDRPQ86YL5 185 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 MB21D2Q8IYB1 491 aaPredicted RBP5.05□□□□□ -1.6
LMBR1-218ENST00000486837 PSPC1Q8WXF1 523 aaKnown RBP5.05□□□□□ -1.6
LMBR1-218ENST00000486837 SLITRK1Q96PX8 696 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 CHCHD6Q9BRQ6 235 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 RBM38Q9H0Z9 239 aaKnown RBP5.05□□□□□ -1.6
LMBR1-218ENST00000486837 MAGEE1Q9HCI5 957 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 BPIFA1Q9NP55 256 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 CYSLTR2Q9NS75 346 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 SLC6A13Q9NSD5 602 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 EHD2Q9NZN4 543 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 MKLN1Q9UL63 735 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 AAR2Q9Y312 384 aaKnown RBP5.05□□□□□ -1.6
LMBR1-218ENST00000486837 NFE2L3Q9Y4A8 694 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 LSM4Q9Y4Z0 139 aaKnown RBP5.05□□□□□ -1.6
LMBR1-218ENST00000486837 KCNE2Q9Y6J6 123 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 SQORQ9Y6N5 450 aa5.05□□□□□ -1.6
LMBR1-218ENST00000486837 BECN2A8MW95 431 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 TNFRSF13BO14836 293 aaPredicted RBP5.04□□□□□ -1.6
LMBR1-218ENST00000486837 ASAP2O43150 1006 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 LIASO43766 372 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 RGS11O94810 467 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 NAGAP17050 411 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 CD58P19256 250 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 GPTP24298 496 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 SHMT1P34896 483 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 THPOP40225 353 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 PIP4K2AP48426 406 aaPredicted RBP5.04□□□□□ -1.6
LMBR1-218ENST00000486837 PGGT1BP53609 377 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 ARF3P61204 181 aaPredicted RBP5.04□□□□□ -1.6
LMBR1-218ENST00000486837 ARF1P84077 181 aaKnown RBP5.04□□□□□ -1.6
LMBR1-218ENST00000486837 PRKG2Q13237 762 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 FGFBP1Q14512 234 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 SGO1Q5FBB7 561 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 FSCBQ5H9T9 825 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 DAB2IPQ5VWQ8 1189 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 ARMC3Q5W041 872 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 NCEH1Q6PIU2 408 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 LINGO2Q7L985 606 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 NOXA1Q86UR1 476 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 TMEM116Q8NCL8 245 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 BEST2Q8NFU1 509 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 GPT2Q8TD30 523 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 ARHGEF2Q92974 986 aaKnown RBP5.04□□□□□ -1.6
LMBR1-218ENST00000486837 PABPC5Q96DU9 382 aaKnown RBP5.04□□□□□ -1.6
LMBR1-218ENST00000486837 PERPQ96FX8 193 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 TIGD1Q96MW7 591 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 PLEKHA5Q9HAU0 1116 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 CLK4Q9HAZ1 481 aaKnown RBP5.04□□□□□ -1.6
LMBR1-218ENST00000486837 SCPEP1Q9HB40 452 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 FBRSL1Q9HCM7 1045 aaKnown RBP5.04□□□□□ -1.6
LMBR1-218ENST00000486837 DLGAP2Q9P1A6 1054 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 SLCO3A1Q9UIG8 710 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 FZD10Q9ULW2 581 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 TTLL3Q9Y4R7 772 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 TTC3P53804 2025 aa5.04□□□□□ -1.6
LMBR1-218ENST00000486837 RUSC2Q8N2Y8 1516 aa5.03□□□□□ -1.6
LMBR1-218ENST00000486837 KDM4EB2RXH2 506 aaPredicted RBP5.03□□□□□ -1.6
LMBR1-218ENST00000486837 WNT9BO14905 357 aa5.03□□□□□ -1.6
LMBR1-218ENST00000486837 BCAT2O15382 392 aaPredicted RBP5.03□□□□□ -1.6
LMBR1-218ENST00000486837 RGS14O43566 566 aa5.03□□□□□ -1.6
LMBR1-218ENST00000486837 ITM2AO43736 263 aa5.03□□□□□ -1.6
LMBR1-218ENST00000486837 EIF2S1P05198 315 aaKnown RBP5.03□□□□□ -1.6
LMBR1-218ENST00000486837 NFKBIAP25963 317 aa5.03□□□□□ -1.6
LMBR1-218ENST00000486837 HOXD3P31249 432 aaPredicted RBP5.03□□□□□ -1.6
LMBR1-218ENST00000486837 RFX5P48382 616 aaPredicted RBP5.03□□□□□ -1.6
LMBR1-218ENST00000486837 CLNS1AP54105 237 aaKnown RBP5.03□□□□□ -1.6
LMBR1-218ENST00000486837 SLC20A2Q08357 652 aa5.03□□□□□ -1.6
LMBR1-218ENST00000486837 CSTF3Q12996 717 aaKnown RBP5.03□□□□□ -1.6
LMBR1-218ENST00000486837 KRT24Q2M2I5 525 aa5.03□□□□□ -1.6
LMBR1-218ENST00000486837 ALG11Q2TAA5 492 aa5.03□□□□□ -1.6
LMBR1-218ENST00000486837 FNBP1LQ5T0N5 605 aa5.03□□□□□ -1.6
LMBR1-218ENST00000486837 TAF3Q5VWG9 929 aa5.03□□□□□ -1.6
LMBR1-218ENST00000486837 KLHL24Q6TFL4 600 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms