RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 APLFQ8IW19 511 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 AFAP1L2Q8N4X5 818 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 CEP70Q8NHQ1 597 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 GATA6Q92908 595 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 B3GALT6Q96L58 329 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 NR1H4Q96RI1 486 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 SEMA3CQ99985 751 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 VCX3BQ9H321 246 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 CYP4F12Q9HCS2 524 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 COMMD8Q9NX08 183 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 MARCH4Q9P2E8 410 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 ADAMTS6Q9UKP5 1117 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 MAGEA13PA6NCF6 341 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 CCL22O00626 93 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 PRAMEF11O60813 436 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 ACVRL1P37023 503 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 CDKN2DP55273 166 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 ILF2Q12905 390 aaKnown RBP18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 MTA1Q13330 715 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 MGAT5BQ3V5L5 792 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 NADSYN1Q6IA69 706 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 SPNS2Q8IVW8 549 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 PGAM4Q8N0Y7 254 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 PELI3Q8N2H9 469 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 HIPK4Q8NE63 616 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 ANKRD49Q8WVL7 239 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 PEX13Q92968 403 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 FEM1CQ96JP0 617 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 MARK4Q96L34 752 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 SEPT5Q99719 369 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 CRISPLD1Q9H336 500 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 SCOCQ9UIL1 159 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 KCTD3Q9Y597 815 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 OR51F1A6NGY5 319 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 H3BNX3 289 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 SKAP2O75563 359 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 INHAP05111 366 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 RAG1P15918 1043 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 HLA-DPA1P20036 260 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 TACR2P21452 398 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 SP100P23497 879 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 PAX7P23759 505 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 GALNT1Q10472 559 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 GPR17Q13304 367 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 LAMB3Q13751 1172 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 BTG3Q14201 252 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 FAM45BPQ6NSW5 357 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 LDB1Q86U70 411 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 ABI1Q8IZP0 508 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 PNPLA1Q8N8W4 532 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 FAM45AQ8TCE6 357 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 MYEOVQ96EZ4 313 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 IFT43Q96FT9 208 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 ELAC1Q9H777 363 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 EFCAB1Q9HAE3 211 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 ZDHHC7Q9NXF8 308 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 DLGAP2Q9P1A6 1054 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 SUFUQ9UMX1 484 aa18.05■□□□□ 0.48
PDLIM7-207ENST00000486828 VNN2O95498 520 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 FGF1P05230 155 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 ZDHHC11BP0C7U3 371 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 KPNA1P52294 538 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 XIAPP98170 497 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 ZNF235Q14590 738 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 RFTN1Q14699 578 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 PIGGQ5H8A4 983 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 TMEM207Q6UWW9 146 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 RNF19BQ6ZMZ0 732 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 CHSY3Q70JA7 882 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 CUZD1Q86UP6 607 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 PDSS2Q86YH6 399 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 CDRT15Q96T59 188 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 SUDS3Q9H7L9 328 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 CCSER2Q9H7U1 834 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 MEAF6Q9HAF1 191 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 PDFQ9HBH1 243 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 MRGBPQ9NV56 204 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 MARCH5Q9NX47 278 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 CASQ2O14958 399 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 MUSKO15146 869 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 GJB3O75712 270 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 EPOP01588 193 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 THOP1P52888 689 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 SMARCB1Q12824 385 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 ZNF423Q2M1K9 1284 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 GPR158Q5T848 1215 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 RSPO2Q6UXX9 243 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 SLC43A3Q8NBI5 491 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 GPR150Q8NGU9 434 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 GDPD5Q8WTR4 605 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 PPP2R3CQ969Q6 453 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 TBATAQ96M53 351 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 ZNF599Q96NL3 588 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 CASD1Q96PB1 797 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 KLHL4Q9C0H6 718 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 WDR41Q9HAD4 459 aa18.04■□□□□ 0.48
PDLIM7-207ENST00000486828 GREB1Q4ZG55 1949 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 TCAF2A6NFQ2 919 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 TBC1D4O60343 1298 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms