RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 AP1B1Q10567 949 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 TARDBPQ13148 414 aaKnown RBP eCLIP6.96□□□□□ -1.3
HDAC3-209ENST00000486618 SNRNP35Q16560 246 aaKnown RBP6.96□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF667Q5HYK9 610 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 C10orf120Q5SQS8 335 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 C11orf88Q6PI97 169 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 NXPE4Q6UWF7 544 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 SEZ6L2Q6UXD5 910 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CCDC81Q6ZN84 652 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 PAQR9Q6ZVX9 377 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 INTS8Q75QN2 995 aaKnown RBP6.96□□□□□ -1.3
HDAC3-209ENST00000486618 BRAPQ7Z569 592 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CACUL1Q86Y37 369 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 TMEM151BQ8IW70 566 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CCDC13Q8IYE1 715 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF619Q8N2I2 560 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF276Q8N554 614 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CCHCR1Q8TD31 782 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 ADAMTS18Q8TE60 1221 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 DENND1AQ8TEH3 1009 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CENPIQ92674 756 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-209ENST00000486618 BIRC7Q96CA5 298 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 NRBF2Q96F24 287 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 TMEM176AQ96HP8 235 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CNDP1Q96KN2 507 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 UBXN10Q96LJ8 280 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CCDC138Q96M89 665 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CDK5RAP1Q96SZ6 601 aaKnown RBP6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CGRRF1Q99675 332 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 ACE2Q9BYF1 805 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-209ENST00000486618 KRTAP9-2Q9BYQ4 174 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CIPCQ9C0C6 399 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CLMPQ9H6B4 373 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 C6orf106Q9H6K1 298 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-209ENST00000486618 SGK2Q9HBY8 427 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CSNK1G1Q9HCP0 422 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 TCF7L1Q9HCS4 588 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 ACTR10Q9NZ32 417 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 GRID1Q9ULK0 1009 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 PLA2G4CQ9UP65 541 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 SCML2Q9UQR0 700 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 LRCH1Q9Y2L9 728 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CAB39Q9Y376 341 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-209ENST00000486618 PCDHA5Q9Y5H7 936 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CELSR3Q9NYQ7 3312 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 COL5A1P20908 1838 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-209ENST00000486618 CFAP46Q8IYW2 2715 aa6.96□□□□□ -1.3
HDAC3-209ENST00000486618 MUC22E2RYF6 1773 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 TP53BP1Q12888 1972 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 FRMD3A2A2Y4 597 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 B4E171 279 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 VILLO15195 856 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 STX6O43752 255 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 RTN2O75298 545 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 DAB1O75553 588 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 PALMO75781 387 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 STC2O76061 302 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 SNUPNO95149 360 aaKnown RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 WNT11O96014 354 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 CYP1A2P05177 515 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 CCND1P24385 295 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 ATP5F1P24539 256 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 PRKCHP24723 683 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 GJB2P29033 226 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 HADHAP40939 763 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 STAT6P42226 847 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 AP3M2P53677 418 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 UCNP55089 124 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 MAP3K7CLP57077 242 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 C21orf58P58505 322 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 SNRPFP62306 86 aaKnown RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 CXADRP78310 365 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 ILKQ13418 452 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 CAMK2GQ13555 558 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 LAPTM5Q13571 262 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 GALEQ14376 348 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 SPARCL1Q14515 664 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 BMT2Q1RMZ1 405 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF699Q32M78 642 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 KRTCAP3Q53RY4 240 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 HES3Q5TGS1 186 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 BROXQ5VW32 411 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 FYB2Q5VWT5 728 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 GPR139Q6DWJ6 353 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 CNNM4Q6P4Q7 775 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 ALKBH5Q6P6C2 394 aaKnown RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 PLEKHM3Q6ZWE6 761 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 SPATC1Q76KD6 591 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 EPM2AIP1Q7L775 607 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 ACOT1Q86TX2 421 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 UNC93AQ86WB7 457 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 FUKQ8N0W3 1084 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 CRYBG2Q8N1P7 616 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 LINC00469Q8N7U9 141 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 XXYLT1Q8NBI6 393 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 ZMIZ2Q8NF64 920 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 SLC2A14Q8TDB8 520 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 CCDC127Q96BQ5 260 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 PIWIL1Q96J94 861 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms