RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 IFT43Q96FT9 208 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 MCCC1Q96RQ3 725 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-225ENST00000483506 AMFRQ9UKV5 643 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 PCDHB9Q9Y5E1 797 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 RAI2Q9Y5P3 530 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 MIF4GDA9UHW6 222 aaKnown RBP18.09■□□□□ 0.49
HDAC6-225ENST00000483506 APOC4-APOC2K7ER74 178 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 SH3BP5O60239 455 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 APOC2P02655 101 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 PRKCGP05129 697 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 NFKBIAP25963 317 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 EPHA8P29322 1005 aaPredicted RBP18.09■□□□□ 0.49
HDAC6-225ENST00000483506 IGFALSP35858 605 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 ARRB1P49407 418 aaPredicted RBP18.09■□□□□ 0.49
HDAC6-225ENST00000483506 RWDD2BP57060 319 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 FAM193AP78312 1265 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 CCZ1BP86790 482 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 CCZ1P86791 482 aaPredicted RBP18.09■□□□□ 0.49
HDAC6-225ENST00000483506 AP1B1Q10567 949 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 SLC14A2Q15849 920 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 KAZNQ674X7 775 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 LIPIQ6XZB0 460 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 Q6ZSR6 202 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 SAP25Q8TEE9 199 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 P3H4Q92791 437 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 TDRD1Q9BXT4 1180 aaKnown RBP18.09■□□□□ 0.49
HDAC6-225ENST00000483506 SAE1Q9UBE0 346 aaPredicted RBP18.09■□□□□ 0.49
HDAC6-225ENST00000483506 B4GALT6Q9UBX8 382 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 PCOLCE2Q9UKZ9 415 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 CAPN6Q9Y6Q1 641 aa18.09■□□□□ 0.49
HDAC6-225ENST00000483506 COL5A1P20908 1838 aaPredicted RBP18.09■□□□□ 0.49
HDAC6-225ENST00000483506 GOLGA6L3A6NEY3 463 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 GIPC1O14908 333 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 NEBLO76041 1014 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 MMP2P08253 660 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 GM2AP17900 193 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 RPL26P61254 145 aaKnown RBP18.08■□□□□ 0.48
HDAC6-225ENST00000483506 ITKQ08881 620 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 LLGL1Q15334 1064 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 KANSL1Q7Z3B3 1105 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 PEX26Q7Z412 305 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 PTAR1Q7Z6K3 402 aaPredicted RBP18.08■□□□□ 0.48
HDAC6-225ENST00000483506 GLRX5Q86SX6 157 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 CBARPQ8N350 705 aaPredicted RBP18.08■□□□□ 0.48
HDAC6-225ENST00000483506 PDCD6IPQ8WUM4 868 aaKnown RBP18.08■□□□□ 0.48
HDAC6-225ENST00000483506 TFB1MQ8WVM0 346 aaKnown RBP18.08■□□□□ 0.48
HDAC6-225ENST00000483506 SCRN2Q96FV2 425 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 HES6Q96HZ4 224 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 HERPUD2Q9BSE4 406 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 OSBPL8Q9BZF1 889 aa18.08■□□□□ 0.48
HDAC6-225ENST00000483506 RPL26L1Q9UNX3 145 aaKnown RBP18.08■□□□□ 0.48
HDAC6-225ENST00000483506 SPTY2D1-AS1A0A0U1RR47 76 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 MED19A0JLT2 244 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-225ENST00000483506 HACD1B0YJ81 288 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 MTSS1O43312 755 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 KRT86O43790 486 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 PRLP01236 227 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 PDHA1P08559 390 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 ADRB1P08588 477 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 ELFN1P0C7U0 828 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 CYP2A6P11509 494 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-225ENST00000483506 CA4P22748 312 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 PTPN3P26045 913 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 VIPR1P32241 457 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 GRK6P43250 576 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 YPEL5P62699 121 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 SKOR1P84550 965 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 XRCC4Q13426 336 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 LRRC14Q15048 493 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 IRF4Q15306 451 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 WSCD2Q2TBF2 565 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 INAVAQ3KP66 663 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 TEX44Q53QW1 395 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 PRAMEF14Q5SWL7 426 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 UBL4BQ8N7F7 174 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 PAF1Q8N7H5 531 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 TADA1Q96BN2 335 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 IMP4Q96G21 291 aaKnown RBP18.07■□□□□ 0.48
HDAC6-225ENST00000483506 QKIQ96PU8 341 aaKnown RBP eCLIP18.07■□□□□ 0.48
HDAC6-225ENST00000483506 MBNL1Q9NR56 388 aaKnown RBP18.07■□□□□ 0.48
HDAC6-225ENST00000483506 COQ6Q9Y2Z9 468 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 TTLL3Q9Y4R7 772 aa18.07■□□□□ 0.48
HDAC6-225ENST00000483506 ARID1BQ8NFD5 2236 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-225ENST00000483506 NPIPB15A6NHN6 443 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-225ENST00000483506 PSMD11O00231 422 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 DDX3YO15523 660 aaKnown RBP18.06■□□□□ 0.48
HDAC6-225ENST00000483506 LZTS3O60299 673 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-225ENST00000483506 HEXIM1O94992 359 aaKnown RBP18.06■□□□□ 0.48
HDAC6-225ENST00000483506 PYGMP11217 842 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 LHCGRP22888 699 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 IL9RQ01113 521 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 SEMG2Q02383 582 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 WASHC5Q12768 1159 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 FZD2Q14332 565 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 NOMO1Q15155 1222 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 CNGA3Q16281 694 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 USP45Q70EL2 814 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 TEKT5Q96M29 485 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 COQ10AQ96MF6 247 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 CAMK1GQ96NX5 476 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms