RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 SPARTQ8N0X7 666 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 TXNDC5Q8NBS9 432 aaKnown RBP11.87□□□□□ -0.51
VTI1A-205ENST00000483122 PDZD8Q8NEN9 1154 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 TRPV3Q8NET8 790 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 LILRB4Q8NHJ6 448 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 SLC22A17Q8WUG5 538 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 TRIB2Q92519 343 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 KHSRPQ92945 711 aaKnown RBP eCLIP11.87□□□□□ -0.51
VTI1A-205ENST00000483122 NXNL1Q96CM4 212 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 ZNF486Q96H40 463 aaPredicted RBP11.87□□□□□ -0.51
VTI1A-205ENST00000483122 MCMBPQ9BTE3 642 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 ADNPQ9H2P0 1102 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 FBRSL1Q9HCM7 1045 aaKnown RBP11.87□□□□□ -0.51
VTI1A-205ENST00000483122 NOTOA8MTQ0 251 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 TNFRSF10AO00220 468 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 DPYSL4O14531 572 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 CILPO75339 1184 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 KRT75O95678 551 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 PFKMP08237 780 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 GFAPP14136 432 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 GOT1P17174 413 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 RPS12P25398 132 aaKnown RBP11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ACTR2P61160 394 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ATP6V0D1P61421 351 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 GRM1Q13255 1194 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 CAPSQ13938 189 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 DPYSL2Q16555 572 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 LRIT3Q3SXY7 679 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 PAGE2BQ5JRK9 111 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 HACD2Q6Y1H2 254 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 KIAA0408Q6ZU52 694 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 R3HCC1LQ7Z5L2 792 aaKnown RBP11.86□□□□□ -0.51
VTI1A-205ENST00000483122 TFAP2DQ7Z6R9 452 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 TMEM135Q86UB9 458 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 NT5DC4Q86YG4 428 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 GPC2Q8N158 579 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ZNF567Q8N184 647 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.86□□□□□ -0.51
VTI1A-205ENST00000483122 AGBL3Q8NEM8 1001 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 TRIM15Q9C019 465 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 THG1LQ9NWX6 298 aaKnown RBP11.86□□□□□ -0.51
VTI1A-205ENST00000483122 CMTM6Q9NX76 183 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.86□□□□□ -0.51
VTI1A-205ENST00000483122 MAP10Q9P2G4 905 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 SIX4Q9UIU6 781 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ZNF229Q9UJW7 825 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ANKRD6Q9Y2G4 727 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 MTF2Q9Y483 593 aaPredicted RBP11.86□□□□□ -0.51
VTI1A-205ENST00000483122 C9JVG2 144 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ARPC2O15144 300 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 NPHS1O60500 1241 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 TNNC2P02585 160 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 GSTM2P28161 218 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 CCND2P30279 289 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 RFC2P35250 354 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 GHRHRQ02643 423 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ACAP2Q15057 778 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 XKR3Q5GH77 459 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 CERCAMQ5T4B2 595 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 PPP2R2DQ66LE6 453 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 LCN8Q6JVE9 175 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 UGT3A1Q6NUS8 523 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ABHD15Q6UXT9 468 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 UTS2BQ765I0 119 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 LINC00523Q86TU6 105 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 AKAP14Q86UN6 197 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ZCCHC7Q8N3Z6 543 aaKnown RBP11.86□□□□□ -0.51
VTI1A-205ENST00000483122 GPR22Q99680 433 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ALOXE3Q9BYJ1 711 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ING2Q9H160 280 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 NOL6Q9H6R4 1146 aaKnown RBP11.86□□□□□ -0.51
VTI1A-205ENST00000483122 MEAF6Q9HAF1 191 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ENPP5Q9UJA9 477 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 CPSF3Q9UKF6 684 aaKnown RBP11.86□□□□□ -0.51
VTI1A-205ENST00000483122 VANGL2Q9ULK5 521 aa11.86□□□□□ -0.51
VTI1A-205ENST00000483122 ZNF638Q14966 1978 aaKnown RBP11.85□□□□□ -0.51
VTI1A-205ENST00000483122 ATP6AP2A0A1C7CYW4 349 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 TTC24A2A3L6 582 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-205ENST00000483122 TCP10L2B9ZVM9 353 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 INPP4BO15327 924 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 NUAK1O60285 661 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 UGT2B11O75310 529 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 ATP6AP2O75787 350 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 ALBP02768 609 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 HTR1AP08908 422 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 NCK1P16333 377 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 CHRM3P20309 590 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 CRHBPP24387 322 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 DGKZQ13574 1117 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 E2F2Q14209 437 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 CTF1Q16619 201 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 CYP51A1Q16850 503 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 PYCR3Q53H96 274 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 OTUD3Q5T2D3 398 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-205ENST00000483122 PRR23BQ6ZRT6 265 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 CDR2LQ86X02 465 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-205ENST00000483122 SCUBE3Q8IX30 993 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 TP53INP2Q8IXH6 220 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 SCML4Q8N228 414 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 ELMOD1Q8N336 334 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms