RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 KDF1Q8NAX2 398 aaPredicted RBP10.66□□□□□ -0.7
SSBP1-210ENST00000481508 NSMCE1Q8WV22 266 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 P3H4Q92791 437 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 ZNF641Q96N77 438 aaPredicted RBP10.66□□□□□ -0.7
SSBP1-210ENST00000481508 WRAP53Q9BUR4 548 aaKnown RBP10.66□□□□□ -0.7
SSBP1-210ENST00000481508 BRD8Q9H0E9 1235 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 KDM4CQ9H3R0 1056 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 ATP13A3Q9H7F0 1226 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 PCDHGA10Q9Y5H3 936 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 KALRNO60229 2985 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 A0A1B0GTW7 788 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 A0A1B0GVT2 93 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 IGLON5A6NGN9 336 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 A8MX80 341 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 H0Y8X5 98 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 GIPC1O14908 333 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 BCAT2O15382 392 aaPredicted RBP10.65□□□□□ -0.7
SSBP1-210ENST00000481508 SLC31A1O15431 190 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 AP1G1O43747 822 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 FZD6O60353 706 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 MMP20O60882 483 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 LRP3O75074 770 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 PRLP01236 227 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 SERPINF2P08697 491 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 ENGP17813 658 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 GM2AP17900 193 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 RBL1P28749 1068 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 SERPINA4P29622 427 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 MMP12P39900 470 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 NR2C2P49116 596 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 ITKQ08881 620 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 SFSWAPQ12872 951 aaKnown RBP10.65□□□□□ -0.7
SSBP1-210ENST00000481508 FOXC1Q12948 553 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 UGP2Q16851 508 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 KCTD19Q17RG1 926 aaPredicted RBP10.65□□□□□ -0.7
SSBP1-210ENST00000481508 DUOXA1Q1HG43 343 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 SLC45A4Q5BKX6 768 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 SYCP2LQ5T4T6 812 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 PSAPL1Q6NUJ1 521 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 SLC23A3Q6PIS1 610 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 BBS5Q8N3I7 341 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 TFB1MQ8WVM0 346 aaKnown RBP10.65□□□□□ -0.7
SSBP1-210ENST00000481508 PIH1D2Q8WWB5 315 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 ZCCHC14Q8WYQ9 949 aaKnown RBP10.65□□□□□ -0.7
SSBP1-210ENST00000481508 AGAP3Q96P47 875 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 GORASP1Q9BQQ3 440 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 POLR1EQ9GZS1 481 aaKnown RBP10.65□□□□□ -0.7
SSBP1-210ENST00000481508 IL21RQ9HBE5 538 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 EFR3BQ9Y2G0 817 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 COQ6Q9Y2Z9 468 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 PCDHB9Q9Y5E1 797 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 RAI2Q9Y5P3 530 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 APC2O95996 2303 aa10.65□□□□□ -0.7
SSBP1-210ENST00000481508 ASXL3Q9C0F0 2248 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 H7C0C1 242 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 CDX4O14627 284 aaPredicted RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 KCNK3O14649 394 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 ENC1O14682 589 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 TM4SF5O14894 197 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 KHNYNO15037 678 aaKnown RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 NRDCO43847 1150 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 SOCS5O75159 536 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 PGLSO95336 258 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 CPP00450 1065 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 ALPIP09923 528 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 CTPS1P17812 591 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 LHCGRP22888 699 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 HOXD12P35452 270 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 CD86P42081 329 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 ATP5OP48047 213 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 CLDN2P57739 230 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 EIF3EP60228 445 aaKnown RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 GRIK2Q13002 908 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 GRM3Q14832 879 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 RPS6KA1Q15418 735 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 SIX1Q15475 284 aaPredicted RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 TMEM52BQ4KMG9 183 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 AASDHQ4L235 1098 aaPredicted RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 SOWAHCQ53LP3 525 aaPredicted RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 TEX44Q53QW1 395 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 BRAT1Q6PJG6 821 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 GCNT7Q6ZNI0 430 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 ADAT2Q7Z6V5 191 aaKnown RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 PRPF39Q86UA1 669 aaKnown RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 ZNF567Q8N184 647 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 SLC35F6Q8N357 371 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 C17orf53Q8N3J3 647 aaPredicted RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 TMEM145Q8NBT3 493 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 SPATA22Q8NHS9 363 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 PDCD6IPQ8WUM4 868 aaKnown RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 ANP32BQ92688 251 aaKnown RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 RAB7BQ96AH8 199 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 TADA1Q96BN2 335 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 IMP4Q96G21 291 aaKnown RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 SERAC1Q96JX3 654 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 RBM15Q96T37 977 aaKnown RBP eCLIP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 KLF6Q99612 283 aaPredicted RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 EDEM2Q9BV94 578 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 C1QTNF2Q9BXJ5 285 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms