RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 KCTD15Q96SI1 283 aaPredicted RBP14.69□□□□□ -0.06
USP11-207ENST00000478596 PSMB7Q99436 277 aa14.69□□□□□ -0.06
USP11-207ENST00000478596 ITPR3Q14573 2671 aa14.69□□□□□ -0.06
USP11-207ENST00000478596 CELSR2Q9HCU4 2923 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 NVLO15381 856 aaKnown RBP14.68□□□□□ -0.06
USP11-207ENST00000478596 TBL1XO60907 577 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 NEBLO76041 1014 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 WT1P19544 449 aaPredicted RBP14.68□□□□□ -0.06
USP11-207ENST00000478596 CTNNA2P26232 953 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 ELAVL4P26378 380 aaKnown RBP14.68□□□□□ -0.06
USP11-207ENST00000478596 MZF1P28698 734 aaPredicted RBP14.68□□□□□ -0.06
USP11-207ENST00000478596 EPHB2P29323 1055 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 SLC6A4P31645 630 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 UGT1A5P35504 534 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 CDH18Q13634 790 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 AUHQ13825 339 aaKnown RBP14.68□□□□□ -0.06
USP11-207ENST00000478596 PDK2Q15119 407 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 CA9Q16790 459 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 FAM133BQ5BKY9 247 aaKnown RBP14.68□□□□□ -0.06
USP11-207ENST00000478596 CCDC181Q5TID7 509 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 TTC39BQ5VTQ0 682 aaPredicted RBP14.68□□□□□ -0.06
USP11-207ENST00000478596 BORAQ6PGQ7 559 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 DSG4Q86SJ6 1040 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 CIR1Q86X95 450 aaPredicted RBP14.68□□□□□ -0.06
USP11-207ENST00000478596 RFX6Q8HWS3 928 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 TICAM1Q8IUC6 712 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 FBXO39Q8N4B4 442 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 KRT35Q92764 455 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 AZIN2Q96A70 460 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 RNF25Q96BH1 459 aaPredicted RBP14.68□□□□□ -0.06
USP11-207ENST00000478596 MAK16Q9BXY0 300 aaKnown RBP14.68□□□□□ -0.06
USP11-207ENST00000478596 CATSPERBQ9H7T0 1116 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 CAAP1Q9H8G2 361 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 ANLNQ9NQW6 1124 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 JRKLQ9Y4A0 524 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 CSNK1G3Q9Y6M4 447 aa14.68□□□□□ -0.06
USP11-207ENST00000478596 CTAGE9A4FU28 777 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 TTC34A8MYJ7 566 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 FGF10O15520 208 aaPredicted RBP14.67□□□□□ -0.06
USP11-207ENST00000478596 IL1BP01584 269 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 SRPRAP08240 638 aaKnown RBP14.67□□□□□ -0.06
USP11-207ENST00000478596 CASQ1P31415 396 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 CSKP41240 450 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 SGSHP51688 502 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 ZNF135P52742 658 aaPredicted RBP14.67□□□□□ -0.06
USP11-207ENST00000478596 POLE2P56282 527 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 HNRNPKP61978 463 aaKnown RBP eCLIP14.67□□□□□ -0.06
USP11-207ENST00000478596 EIF4EBP2Q13542 120 aaPredicted RBP14.67□□□□□ -0.06
USP11-207ENST00000478596 ELAVL3Q14576 367 aaKnown RBP14.67□□□□□ -0.06
USP11-207ENST00000478596 DPYSL2Q16555 572 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 POM121L1PQ3SYA9 428 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 ATP13A4Q4VNC1 1196 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 MEI1Q5TIA1 1274 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 KAZNQ674X7 775 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 RAB11FIP2Q7L804 512 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 TFAP2DQ7Z6R9 452 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 VASH2Q86V25 355 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 ATCAYQ86WG3 371 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 ZNF354CQ86Y25 554 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 JAMLQ86YT9 394 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 KATNAL2Q8IYT4 538 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 CFAP52Q8N1V2 620 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 STK40Q8N2I9 435 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 CARNMT1Q8N4J0 409 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 ZNF592Q92610 1267 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 PRICKLE1Q96MT3 831 aaPredicted RBP14.67□□□□□ -0.06
USP11-207ENST00000478596 PHF12Q96QT6 1004 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 NAPGQ99747 312 aaPredicted RBP14.67□□□□□ -0.06
USP11-207ENST00000478596 ZYG11BQ9C0D3 744 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 PCDH18Q9HCL0 1135 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 KCND1Q9NSA2 647 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 DNAI1Q9UI46 699 aa14.67□□□□□ -0.06
USP11-207ENST00000478596 TCAF2A6NFQ2 919 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 LRIG2O94898 1065 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 ZRANB2O95218 330 aaKnown RBP eCLIP14.66□□□□□ -0.06
USP11-207ENST00000478596 L1CAMP32004 1257 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 HTR7P34969 479 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 RPS24P62847 133 aaKnown RBP14.66□□□□□ -0.06
USP11-207ENST00000478596 DYNLT1P63172 113 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 SPIDRQ14159 915 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 NR0B2Q15466 257 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 PERM1Q5SV97 790 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 FBXL22Q6P050 247 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 CRTC1Q6UUV9 634 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 RFX8Q6ZV50 586 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 CYP4V2Q6ZWL3 525 aaPredicted RBP14.66□□□□□ -0.06
USP11-207ENST00000478596 MFN1Q8IWA4 741 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 SLC22A18ASQ8N1D0 253 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 ZNF548Q8NEK5 533 aaPredicted RBP14.66□□□□□ -0.06
USP11-207ENST00000478596 OR13H1Q8NG92 308 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 FIBINQ8TAL6 211 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 ZNF670Q9BS34 389 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 MPP6Q9NZW5 540 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 INTS6Q9UL03 887 aaKnown RBP14.66□□□□□ -0.06
USP11-207ENST00000478596 ERVW-1Q9UQF0 538 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 PCDHA3Q9Y5H8 950 aa14.66□□□□□ -0.06
USP11-207ENST00000478596 POLQO75417 2590 aa14.65□□□□□ -0.06
USP11-207ENST00000478596 OTOGQ6ZRI0 2925 aa14.65□□□□□ -0.06
USP11-207ENST00000478596 FAM72CH0Y354 149 aa14.65□□□□□ -0.06
USP11-207ENST00000478596 TMX2-CTNND1H3BSU7 103 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms