RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LMLNQ96KR4 655 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 TEFMQ96QE5 360 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 LBHD1Q9BQE6 289 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 NTPCRQ9BSD7 190 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 FZD3Q9NPG1 666 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 GRHL1Q9NZI5 618 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 UTS2RQ9UKP6 389 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 FBXO4Q9UKT5 387 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 CAMK2AQ9UQM7 478 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 LAS1LQ9Y4W2 734 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 QRICH2Q9H0J4 1663 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 PIK3C2GO75747 1445 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 ADGRL3Q9HAR2 1447 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 A0A0G2JK05 382 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 TCRBV7S3A2A0A539 114 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 DPPA5A6NC42 116 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 NPIPB15A6NHN6 443 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 A6NNC1 897 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 TNFRSF13BO14836 293 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 MSI1O43347 362 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 DDAH2O95865 285 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 SERPINC1P01008 464 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 LCKP06239 509 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 CHRNB1P11230 501 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 LAMP2P13473 410 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 CHRNA5P30532 468 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 ARRB2P32121 409 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 SKIV2L2P42285 1042 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 HARS2P49590 506 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 CLNS1AP54105 237 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 SETQ01105 290 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 HYAL1Q12794 435 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 PDE1CQ14123 709 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 TBCEQ15813 527 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 SLC45A4Q5BKX6 768 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 C6orf10Q5SRN2 563 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 SNX30Q5VWJ9 437 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 ZNF324BQ6AW86 544 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 TMEM81Q6P7N7 255 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 FASTKD5Q7L8L6 764 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 RRM2BQ7LG56 351 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 ADSSL1Q8N142 457 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 PLD5Q8N7P1 536 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 C11orf65Q8NCR3 313 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 ETNPPLQ8TBG4 499 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 CREB3L4Q8TEY5 395 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 OIT3Q8WWZ8 545 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 NEUROG1Q92886 237 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 MIB2Q96AX9 1013 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 MSI2Q96DH6 328 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 SAAL1Q96ER3 474 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 PIMREGQ9BSJ6 248 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 SF3B5Q9BWJ5 86 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 BRF2Q9HAW0 419 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 ATP8A2Q9NTI2 1148 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 TXLNGQ9NUQ3 528 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 DHDHQ9UQ10 334 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 USP32Q8NFA0 1604 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 FAM135BQ49AJ0 1406 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 PTPRUQ92729 1446 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 AKAP12Q02952 1782 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 MSH6P52701 1360 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 TMEM94Q12767 1356 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 ANKRD30BQ9BXX2 1392 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 RAB3GAP2Q9H2M9 1393 aa4.27□□□□□ -1.73
CDC42BPA-212ENST00000478573 TRPM3Q9HCF6 1732 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 NWD2Q9ULI1 1742 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 RPGRIP1LQ68CZ1 1315 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 PLCH1Q4KWH8 1693 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 ALS2Q96Q42 1657 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 KIR2DS5A0A0G2JLQ3 304 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 EME2A4GXA9 379 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 CYSRT1A8MQ03 144 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 K7ENM7 598 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 KIR2DS3K7RE56 304 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 TAF4O00268 1085 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 CEP104O60308 925 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 TOM1O60784 492 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 ADAP00813 363 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 WNT1P04628 370 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 CIITAP33076 1130 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 BSGP35613 385 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 PTPN9P43378 593 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 KCNJ4P48050 445 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 CYP2J2P51589 502 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 EIF3BP55884 814 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 RPL7AP62424 266 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 FOXD4Q12950 439 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 EIF4A2Q14240 407 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 GALNT3Q14435 633 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 PGM5Q15124 567 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 SLC9B1Q4ZJI4 515 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 TMEM268Q5VZI3 342 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 TBC1D9BQ66K14 1250 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 LRIG3Q6UXM1 1119 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 PXKQ7Z7A4 578 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 TMEM217Q8N7C4 229 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 ZBTB8BQ8NAP8 495 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms