RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TRPM6Q9BX84 2022 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 CCDC187A0A096LP49 1063 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 ZW10O43264 779 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 SOCS5O75159 536 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 MYF5P13349 255 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 ZNF165P49910 485 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 CXADRP78310 365 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 C19orf57Q0VDD7 668 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 PEX6Q13608 980 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 LBRQ14739 615 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 ALG11Q2TAA5 492 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 BOLA3Q53S33 107 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 TDRD12Q587J7 1177 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 RALGPS1Q5JS13 557 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 AFMIDQ63HM1 303 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 DPPA4Q7L190 304 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 RD3Q7Z3Z2 195 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 TSEN2Q8NCE0 465 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 PCDH19Q8TAB3 1148 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 VOPP1Q96AW1 172 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 ECHDC3Q96DC8 303 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 PSKH2Q96QS6 385 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 GFM1Q96RP9 751 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 KCTD15Q96SI1 283 aaPredicted RBP14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 TCEAL2Q9H3H9 227 aaPredicted RBP14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 WDR26Q9H7D7 661 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 GULP1Q9UBP9 304 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 SATB2Q9UPW6 733 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 COQ6Q9Y2Z9 468 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 DGKBQ9Y6T7 804 aa14.53□□□□□ -0.08
SMARCE1-209ENST00000478349 TNFRSF10CO14798 259 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 TEX33O43247 280 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 LRCH4O75427 683 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 RECQL5O94762 991 aaPredicted RBP14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 SCNN1BP51168 640 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 RHDQ02161 417 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 PIGHQ14442 188 aaPredicted RBP14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 FIGNQ5HY92 759 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 NDUFAF2Q8N183 169 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 ATPAF2Q8N5M1 289 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 NETO2Q8NC67 525 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 OR56A4Q8NGH8 313 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 KIAA1524Q8TCG1 905 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 SLC39A7Q92504 469 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 SPOCK2Q92563 424 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 ATXN7L3BQ96GX2 97 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 LIN37Q96GY3 246 aaPredicted RBP14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 CRELD1Q96HD1 420 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 RBM15Q96T37 977 aaKnown RBP eCLIP14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 MYO1AQ9UBC5 1043 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 OR1A2Q9Y585 309 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 ENTPD2Q9Y5L3 495 aa14.52□□□□□ -0.09
SMARCE1-209ENST00000478349 IGSF10Q6WRI0 2623 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 A0A1B0GTH6 734 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 ERVH48-1M5A8F1 160 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 KLK10O43240 276 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 BUB1BO60566 1050 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 ITGA2BP08514 1039 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 HOXC4P09017 264 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 CYP2A6P11509 494 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 ITIH2P19823 946 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 CDH6P55285 790 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 DPYSQ14117 519 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 ACOX1Q15067 660 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 DPYSL2Q16555 572 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 CA9Q16790 459 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 PERM1Q5SV97 790 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 CRTC1Q6UUV9 634 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 ZNF571Q7Z3V5 609 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 LRRC49Q8IUZ0 686 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 ARHGAP12Q8IWW6 846 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 KYQ8NBH2 561 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 TSACCQ96A04 125 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 NAF1Q96HR8 494 aaKnown RBP14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 TMEM74Q96NL1 305 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 SLC46A1Q96NT5 459 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 PEBP4Q96S96 227 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 CLPBQ9H078 707 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 ASCL3Q9NQ33 180 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 CWC15Q9P013 229 aaKnown RBP14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 SIRPGQ9P1W8 387 aa14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 ARID1BQ8NFD5 2236 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-209ENST00000478349 DDX3XO00571 662 aaKnown RBP eCLIP14.5□□□□□ -0.093e-10■■■■□ 24
SMARCE1-209ENST00000478349 CPP00450 1065 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 TAF1BQ53T94 588 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 FOXR1Q6PIV2 292 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 LIPIQ6XZB0 460 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 USP45Q70EL2 814 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 TAF8Q7Z7C8 310 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 NPWQ8N729 165 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 TEKT4Q8WW24 435 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 SYN2Q92777 582 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 CCDC74AQ96AQ1 378 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 TMEM159Q96B96 161 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 NUS1Q96E22 293 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 PDXPQ96GD0 296 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 BBC3Q96PG8 261 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms