RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 CCINQ13939 588 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 CRYMQ14894 314 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 PTPRRQ15256 657 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 ANKRD20A4Q4UJ75 823 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 LRRC73Q5JTD7 316 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 ARMC3Q5W041 872 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 USP45Q70EL2 814 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 MMAAQ8IVH4 418 aaKnown RBP13.38□□□□□ -0.27
LMNA-214ENST00000478063 UBALD2Q8IYN6 164 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 TMIEQ8NEW7 156 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 RPLP0P6Q8NHW5 317 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 BRSK1Q8TDC3 778 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 PPP1R16AQ96I34 528 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 SHDQ96IW2 340 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 ZIM3Q96PE6 472 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 RUFY1Q96T51 708 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 GABRG3Q99928 467 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 KIFC1Q9BW19 673 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 SARDHQ9UL12 918 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 PPM1HQ9ULR3 514 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 MRPS17Q9Y2R5 130 aaKnown RBP13.38□□□□□ -0.27
LMNA-214ENST00000478063 ZNF711Q9Y462 761 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 TRPM6Q9BX84 2022 aa13.38□□□□□ -0.27
LMNA-214ENST00000478063 TCRBV9S1A1TA0A576 114 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 KRBA1A5PL33 1030 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 CAPN8A6NHC0 703 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 UPK3BL1B0FP48 263 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 UPK3BL2E5RIL1 263 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 LDB2O43679 373 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 BUD23O43709 281 aaKnown RBP13.37□□□□□ -0.27
LMNA-214ENST00000478063 RNASEH1O60930 286 aaKnown RBP13.37□□□□□ -0.27
LMNA-214ENST00000478063 USP1O94782 785 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 SHBGP04278 402 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 NUDT17P0C025 328 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 NFKBIAP25963 317 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 ITGB7P26010 798 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 STX2P32856 288 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 HNF1BP35680 557 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 METAP1P53582 386 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 LRRC32Q14392 662 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 UBXN2BQ14CS0 331 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 TAF1AQ15573 450 aaPredicted RBP13.37□□□□□ -0.27
LMNA-214ENST00000478063 SMAD1Q15797 465 aaKnown RBP13.37□□□□□ -0.27
LMNA-214ENST00000478063 EOGTQ5NDL2 527 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 TSTD2Q5T7W7 516 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 ALS2CLQ60I27 953 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 PARS2Q7L3T8 475 aaKnown RBP13.37□□□□□ -0.27
LMNA-214ENST00000478063 NLRP9Q7RTR0 991 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 LYSMD3Q7Z3D4 306 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 TMEM135Q86UB9 458 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 CACUL1Q86Y37 369 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.37□□□□□ -0.277e-8■■■■■ 33.6
LMNA-214ENST00000478063 MDGA1Q8NFP4 955 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 OR2W6PQ8NHA6 318 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 FBF1Q8TES7 1133 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 ARRDC3Q96B67 414 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 ZBTB9Q96C00 473 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 MFSD3Q96ES6 412 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 ZNF778Q96MU6 729 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 FCRL3Q96P31 734 aaPredicted RBP13.37□□□□□ -0.27
LMNA-214ENST00000478063 GPR63Q9BZJ6 419 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 RSPH9Q9H1X1 276 aaPredicted RBP13.37□□□□□ -0.27
LMNA-214ENST00000478063 ACBD3Q9H3P7 528 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 PLAC1Q9HBJ0 212 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 MAGEE1Q9HCI5 957 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 DYRK4Q9NR20 520 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 DKK3Q9UBP4 350 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 ARL5AQ9Y689 179 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 UNC80Q8N2C7 3258 aa13.37□□□□□ -0.27
LMNA-214ENST00000478063 C1orf232A0A0U1RR37 186 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 EXOC1LA0A1B0GW35 172 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 MROH6A6NGR9 719 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 NPIPB15A6NHN6 443 aaPredicted RBP13.36□□□□□ -0.27
LMNA-214ENST00000478063 C2orf81A6NN90 581 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 C16orf96A6NNT2 1141 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 A8MX80 341 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 AURKAO14965 403 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 ADAM23O75077 832 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 SASH3O75995 380 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 PAPSS2O95340 614 aaPredicted RBP13.36□□□□□ -0.27
LMNA-214ENST00000478063 TIMP2P16035 220 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 PAMP19021 973 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 COL9A1P20849 921 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 LPOP22079 712 aaPredicted RBP13.36□□□□□ -0.27
LMNA-214ENST00000478063 TARSP26639 723 aaKnown RBP13.36□□□□□ -0.27
LMNA-214ENST00000478063 TMPRSS15P98073 1019 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 SEMG2Q02383 582 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 EFTUD2Q15029 972 aaKnown RBP eCLIP13.36□□□□□ -0.27
LMNA-214ENST00000478063 CST6Q15828 149 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 UGP2Q16851 508 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 HSF5Q4G112 596 aaPredicted RBP13.36□□□□□ -0.27
LMNA-214ENST00000478063 FAM46CQ5VWP2 391 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 ZNF776Q68DI1 518 aaPredicted RBP13.36□□□□□ -0.27
LMNA-214ENST00000478063 KIAA1211LQ6NV74 962 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 ESRP1Q6NXG1 681 aaKnown RBP13.36□□□□□ -0.27
LMNA-214ENST00000478063 TTC7BQ86TV6 843 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 GJD3Q8N144 294 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 SIX5Q8N196 739 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 TTC30BQ8N4P2 665 aa13.36□□□□□ -0.27
LMNA-214ENST00000478063 OR2T3Q8NH03 318 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms