RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 KLF10Q13118 480 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 LAMB3Q13751 1172 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 RFTN1Q14699 578 aaPredicted RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 PTPRCAPQ14761 206 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 CFAP157Q5JU67 520 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 TPGS2Q68CL5 300 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 CXorf57Q6NSI4 855 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 SLC39A5Q6ZMH5 540 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 PIWIL4Q7Z3Z4 852 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 CPSF7Q8N684 471 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 SHKBP1Q8TBC3 707 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 ANKRD27Q96NW4 1050 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 OSBPL1AQ9BXW6 950 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 POMKQ9H5K3 350 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 SUDS3Q9H7L9 328 aaPredicted RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 SAGE1Q9NXZ1 904 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 AGO1Q9UL18 857 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 MTF2Q9Y483 593 aaPredicted RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 YIPF1Q9Y548 306 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 H0Y3Z8 333 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 DCXO43602 365 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 RPP40O75818 363 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 UPP2O95045 317 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 F11P03951 625 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 PTDSS1P48651 473 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 ZNF140P52738 457 aaPredicted RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 PRAMEP78395 509 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 SLC25A3Q00325 362 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 ILF2Q12905 390 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 ACAP2Q15057 778 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 CYTH1Q15438 398 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 FAM83EQ2M2I3 478 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 TYSND1Q2T9J0 566 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 LSM12Q3MHD2 195 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 FSCBQ5H9T9 825 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 AGAP9Q5VTM2 703 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 IL31Q6EBC2 164 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 PGM2L1Q6PCE3 622 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 TMEM150AQ86TG1 271 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 SETD3Q86TU7 594 aaPredicted RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 OR13C4Q8NGS5 318 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 OR6P1Q8NGX9 317 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 BLOC1S5Q8TDH9 187 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 KCNV2Q8TDN2 545 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 ZNF689Q96CS4 500 aaPredicted RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 CMTM5Q96DZ9 223 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 MAELQ96JY0 434 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 ZFRQ96KR1 1074 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 THTPAQ9BU02 230 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 CCDC28BQ9BUN5 200 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 WDR55Q9H6Y2 383 aaPredicted RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 GPAMQ9HCL2 828 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 GKN1Q9NS71 199 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 UBA2Q9UBT2 640 aaPredicted RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 LRRC42Q9Y546 428 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 CCDC162PA2VCL2 907 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 C2orf78A6NCI8 922 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 NEMP2A6NFY4 417 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 A8MT66 165 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 CD160O95971 181 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 PRLP01236 227 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 CCDC166P0CW27 439 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 CD1EP15812 388 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 NCF2P19878 526 aaPredicted RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 OXCT1P55809 520 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 C1QTNF8P60827 252 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 ACTR3P61158 418 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 TRMT5Q32P41 509 aaKnown RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 FAM45BPQ6NSW5 357 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 TRIM67Q6ZTA4 783 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 FRMD7Q6ZUT3 714 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 FAM45AQ8TCE6 357 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 HERC2P3Q9BVR0 1158 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 NACA2Q9H009 215 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 NCKIPSDQ9NZQ3 722 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 TRPM5Q9NZQ8 1165 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 CORO1CQ9ULV4 474 aaPredicted RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 SPO11Q9Y5K1 396 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 A0A1B0GVM2 712 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 TCAF2A6NFQ2 919 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 CD3EAPO15446 510 aaKnown RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 COX4I1P13073 169 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 ITGAXP20702 1163 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 OGNP20774 298 aaKnown RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 SP100P23497 879 aaPredicted RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 RCN1Q15293 331 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 ADGRF1Q5T601 910 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 CNKSR3Q6P9H4 555 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 RIPOR1Q6ZS17 1223 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 PIM3Q86V86 326 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 MYLK4Q86YV6 388 aaPredicted RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 SLC39A11Q8N1S5 342 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 NRG4Q8WWG1 115 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 SGF29Q96ES7 293 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 TOX2Q96NM4 488 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 CINPQ9BW66 212 aaPredicted RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 TDRD1Q9BXT4 1180 aaKnown RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 NUF2Q9BZD4 464 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 NLE1Q9NVX2 485 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms