RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 VPS39Q96JC1 886 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 SERAC1Q96JX3 654 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 EXOC2Q96KP1 924 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 ZNF778Q96MU6 729 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 LRRC3BQ96PB8 259 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 NSRP1Q9H0G5 558 aaKnown RBP13.34□□□□□ -0.27
SEC22A-205ENST00000477063 ECT2Q9H8V3 914 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 INTS10Q9NVR2 710 aaKnown RBP13.34□□□□□ -0.27
SEC22A-205ENST00000477063 DEC1Q9P2X7 70 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 MID2Q9UJV3 735 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 GRID1Q9ULK0 1009 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 ERVW-1Q9UQF0 538 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 PCDHGC4Q9Y5F7 938 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 ACTL7AQ9Y615 435 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 CEP290O15078 2479 aa13.34□□□□□ -0.27
SEC22A-205ENST00000477063 MYOFQ9NZM1 2061 aa13.33□□□□□ -0.27
SEC22A-205ENST00000477063 A0A0J9YYE9 177 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 NPC1O15118 1278 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 SMAD6O43541 496 aaKnown RBP13.33□□□□□ -0.28
SEC22A-205ENST00000477063 TULP3O75386 442 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 FAM107AO95990 144 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 TRBC1P01850 177 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 DHRS4L1P0CG22 281 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 PYGBP11216 843 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 CREB1P16220 341 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 CRABP2P29373 138 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 TYK2P29597 1187 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 PPARGP37231 505 aaPredicted RBP13.33□□□□□ -0.28
SEC22A-205ENST00000477063 SLC26A3P40879 764 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 VIPR2P41587 438 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 CSRP3P50461 194 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 ST8SIA6P61647 398 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 POU4F1Q01851 419 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 DLG2Q15700 870 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 DGKKQ5KSL6 1271 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 MROH9Q5TGP6 573 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 HHATQ5VTY9 493 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 ASTLQ6HA08 431 aaPredicted RBP13.33□□□□□ -0.28
SEC22A-205ENST00000477063 GRAMD4Q6IC98 578 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 FSTL4Q6MZW2 842 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 BRAT1Q6PJG6 821 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 CILP2Q8IUL8 1156 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 UNC5BQ8IZJ1 945 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 CBARPQ8N350 705 aaPredicted RBP13.33□□□□□ -0.28
SEC22A-205ENST00000477063 MDM1Q8TC05 714 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 TCP10LQ8TDR4 215 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 UCMAQ8WVF2 138 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 PIH1D2Q8WWB5 315 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 RSPRY1Q96DX4 576 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 TSPAN17Q96FV3 270 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 CHMP6Q96FZ7 201 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 CDKN2AIPNLQ96HQ2 116 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 SUV39H2Q9H5I1 410 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 CLEC1BQ9P126 229 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 EPS15L1Q9UBC2 864 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 HECAQ9UBI9 543 aaPredicted RBP13.33□□□□□ -0.28
SEC22A-205ENST00000477063 FBXO5Q9UKT4 447 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 PLLPQ9Y342 182 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 PCDHB9Q9Y5E1 797 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 DOCK8Q8NF50 2099 aa13.33□□□□□ -0.28
SEC22A-205ENST00000477063 ZNF106Q9H2Y7 1883 aaKnown RBP13.32□□□□□ -0.28
SEC22A-205ENST00000477063 TSPAN11A1L157 253 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 CAPN8A6NHC0 703 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 K7ERQ8 282 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 RFXAPO00287 272 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 BIRC5O15392 142 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 UGT1A9O60656 530 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 ALDOAP04075 364 aaKnown RBP13.32□□□□□ -0.28
SEC22A-205ENST00000477063 APOA4P06727 396 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 PDHA1P08559 390 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 LAMP2P13473 410 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 CD9P21926 228 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 RPA3P35244 121 aaPredicted RBP13.32□□□□□ -0.28
SEC22A-205ENST00000477063 SLC1A2P43004 574 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 ETV4P43268 484 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 SUOXP51687 545 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 KPNA2P52292 529 aaKnown RBP13.32□□□□□ -0.28
SEC22A-205ENST00000477063 RUNX3Q13761 415 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 PDK4Q16654 411 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 TYSND1Q2T9J0 566 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 CCDC153Q494R4 210 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 TAF1BQ53T94 588 aaPredicted RBP13.32□□□□□ -0.28
SEC22A-205ENST00000477063 ZNF470Q6ECI4 717 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 VITQ6UXI7 678 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 USP45Q70EL2 814 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 TTC30BQ8N4P2 665 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 OR4L1Q8NH43 312 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 DTX3LQ8TDB6 740 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 FRS2Q8WU20 508 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 HDAC10Q969S8 669 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.32□□□□□ -0.282e-6■■■■■ 54.9
SEC22A-205ENST00000477063 GRAMD1AQ96CP6 724 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 MSLNLQ96KJ4 702 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 NSMCE3Q96MG7 304 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 MCCC1Q96RQ3 725 aaPredicted RBP13.32□□□□□ -0.28
SEC22A-205ENST00000477063 AGAP2Q99490 1192 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 HEPHQ9BQS7 1158 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 TM6SF2Q9BZW4 377 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 UGT1A7Q9HAW7 530 aa13.32□□□□□ -0.28
SEC22A-205ENST00000477063 UGT1A10Q9HAW8 530 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms