RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 PROSCO94903 275 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 H2AFZP0C0S5 128 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 CR2P20023 1033 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 GJC1P36383 396 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 HSPA9P38646 679 aaKnown RBP12.32□□□□□ -0.44
SSR1-205ENST00000475213 INSM1Q01101 510 aaPredicted RBP12.32□□□□□ -0.44
SSR1-205ENST00000475213 CYP4F3Q08477 520 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 RALGDSQ12967 914 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.442e-15■■□□□ 11.6
SSR1-205ENST00000475213 DPYSL3Q14195 570 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 AGERQ15109 404 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 MACC1Q6ZN28 852 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 H2AFVQ71UI9 128 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 VSTM4Q8IW00 320 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 PHACTR4Q8IZ21 702 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 RNF214Q8ND24 703 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 LMX1AQ8TE12 382 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 BTN2A2Q8WVV5 523 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 CTNNBL1Q8WYA6 563 aaPredicted RBP12.32□□□□□ -0.44
SSR1-205ENST00000475213 MGME1Q9BQP7 344 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 DEF6Q9H4E7 631 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 SPASTQ9UBP0 616 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 DKK4Q9UBT3 224 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 APOBEC3BQ9UH17 382 aaKnown RBP12.32□□□□□ -0.44
SSR1-205ENST00000475213 U3KQA8 63 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 NBEAQ8NFP9 2946 aa12.32□□□□□ -0.44
SSR1-205ENST00000475213 ADAMTS20P59510 1910 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 ZFYVE26Q68DK2 2539 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.31□□□□□ -0.44
SSR1-205ENST00000475213 CFAP69A5D8W1 941 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 TMEM110-MUSTN1A8MSY1 372 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 HTRA2O43464 458 aaPredicted RBP12.31□□□□□ -0.44
SSR1-205ENST00000475213 MFSD11O43934 449 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 GCATO75600 419 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 PEX5P50542 639 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 TAS2R40P59535 323 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 MAXP61244 160 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 POLR2LP62875 67 aaKnown RBP12.31□□□□□ -0.44
SSR1-205ENST00000475213 E2F1Q01094 437 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 C1orf61Q13536 156 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 INPP5AQ14642 412 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 DEFB133Q30KQ1 61 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 PRRT3Q5FWE3 981 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 FAXCQ5TGI0 409 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 ZCCHC8Q6NZY4 707 aaKnown RBP12.31□□□□□ -0.44
SSR1-205ENST00000475213 LIPIQ6XZB0 460 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 DPPA4Q7L190 304 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 BBS5Q8N3I7 341 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 PAF1Q8N7H5 531 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 KCTD6Q8NC69 237 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 NSMCE1Q8WV22 266 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 NUDCD1Q96RS6 583 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 CHP1Q99653 195 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 APOOQ9BUR5 198 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 LRRC61Q9BV99 259 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 SLC13A1Q9BZW2 595 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 USP29Q9HBJ7 922 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 NOD2Q9HC29 1040 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 ABHD10Q9NUJ1 306 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 ZNHIT6Q9NWK9 470 aaKnown RBP12.31□□□□□ -0.44
SSR1-205ENST00000475213 PCDHGC4Q9Y5F7 938 aa12.31□□□□□ -0.44
SSR1-205ENST00000475213 ARHGEF17Q96PE2 2063 aaPredicted RBP12.3□□□□□ -0.44
SSR1-205ENST00000475213 A8MX80 341 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 TPP1O14773 563 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 AKR1B10O60218 316 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 MFAP3LO75121 409 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 SOCS5O75159 536 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 RECQL5O94762 991 aaPredicted RBP12.3□□□□□ -0.44
SSR1-205ENST00000475213 PCCBP05166 539 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 GP1BAP07359 652 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 TPM1P09493 284 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 TMEM253P0C7T8 217 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 ELFN1P0C7U0 828 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 GM2AP17900 193 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 MMP13P45452 471 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 DUSP3P51452 185 aaPredicted RBP12.3□□□□□ -0.44
SSR1-205ENST00000475213 ADKP55263 362 aaKnown RBP12.3□□□□□ -0.44
SSR1-205ENST00000475213 PPARDQ03181 441 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 NFATC4Q14934 902 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 PAFAH1B3Q15102 231 aaKnown RBP12.3□□□□□ -0.44
SSR1-205ENST00000475213 PDK2Q15119 407 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 TSR1Q2NL82 804 aaKnown RBP12.3□□□□□ -0.44
SSR1-205ENST00000475213 ANKRD20A8PQ5CZ79 823 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 MARC1Q5VT66 337 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 NCBP2-AS2Q69YL0 99 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 LRRC49Q8IUZ0 686 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 CACTIN-AS1Q8N1I8 211 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 TEX26Q8N6G2 289 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 PLA2G15Q8NCC3 412 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 PCDH19Q8TAB3 1148 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 PDCD6IPQ8WUM4 868 aaKnown RBP12.3□□□□□ -0.44
SSR1-205ENST00000475213 TSACCQ96A04 125 aaPredicted RBP12.3□□□□□ -0.44
SSR1-205ENST00000475213 TBATAQ96M53 351 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 IL12RB2Q99665 862 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 ZNF670Q9BS34 389 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 CLPBQ9H078 707 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 B4GALT6Q9UBX8 382 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 LCMT1Q9UIC8 334 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 SALL4Q9UJQ4 1053 aa12.3□□□□□ -0.44
SSR1-205ENST00000475213 RALYQ9UKM9 306 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms