RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 DNAAF3Q8N9W5 541 aa9.58□□□□□ -0.88
DDX39B-217ENST00000474961 PDCD6IPQ8WUM4 868 aaKnown RBP9.58□□□□□ -0.88
DDX39B-217ENST00000474961 LRIG1Q96JA1 1093 aa9.58□□□□□ -0.88
DDX39B-217ENST00000474961 ZNF641Q96N77 438 aaPredicted RBP9.58□□□□□ -0.88
DDX39B-217ENST00000474961 KLHL32Q96NJ5 620 aa9.58□□□□□ -0.88
DDX39B-217ENST00000474961 SERPINB12Q96P63 405 aa9.58□□□□□ -0.88
DDX39B-217ENST00000474961 NELL2Q99435 816 aa9.58□□□□□ -0.88
DDX39B-217ENST00000474961 FMO2Q99518 471 aa9.58□□□□□ -0.88
DDX39B-217ENST00000474961 OSBPL1AQ9BXW6 950 aa9.58□□□□□ -0.88
DDX39B-217ENST00000474961 FRMD8Q9BZ67 464 aaPredicted RBP9.58□□□□□ -0.88
DDX39B-217ENST00000474961 FOXP3Q9BZS1 431 aa9.58□□□□□ -0.88
DDX39B-217ENST00000474961 TBC1D17Q9HA65 648 aa9.58□□□□□ -0.88
DDX39B-217ENST00000474961 ARNT2Q9HBZ2 717 aa9.58□□□□□ -0.88
DDX39B-217ENST00000474961 XAB2Q9HCS7 855 aaKnown RBP9.58□□□□□ -0.88
DDX39B-217ENST00000474961 PIH1D1Q9NWS0 290 aaKnown RBP9.58□□□□□ -0.88
DDX39B-217ENST00000474961 LRRK1Q38SD2 2015 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 A0A1W2PQF6 199 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 AP3B1O00203 1094 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 PPFIA2O75334 1257 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 BANF1O75531 89 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 FGF1P05230 155 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 TPH1P17752 444 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 HLA-DPA1P20036 260 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 MGAT1P26572 445 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 MAGEA3P43357 314 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 PSMD8P48556 350 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 NPY2RP49146 381 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 SESN2P58004 480 aaPredicted RBP9.57□□□□□ -0.88
DDX39B-217ENST00000474961 CDH17Q12864 832 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 CBLBQ13191 982 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 MTM1Q13496 603 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 ELAVL3Q14576 367 aaKnown RBP9.57□□□□□ -0.88
DDX39B-217ENST00000474961 STARD3Q14849 445 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 HIF1AQ16665 826 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 BBS9Q3SYG4 887 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 ZNF805Q5CZA5 627 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 CERCAMQ5T4B2 595 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 CFAP58Q5T655 872 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 KIAA1211LQ6NV74 962 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 Q6ZS52 159 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 DSG4Q86SJ6 1040 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 CCDC25Q86WR0 208 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 ZSWIM9Q86XI8 627 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 MMAAQ8IVH4 418 aaKnown RBP9.57□□□□□ -0.88
DDX39B-217ENST00000474961 PDIK1LQ8N165 341 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 PAF1Q8N7H5 531 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 TMIEQ8NEW7 156 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 LPCAT1Q8NF37 534 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 OR2T3Q8NH03 318 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 PIP4K2CQ8TBX8 421 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 PIH1D2Q8WWB5 315 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.57□□□□□ -0.88
DDX39B-217ENST00000474961 RMDN1Q96DB5 314 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 ECHDC3Q96DC8 303 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 UHRF1Q96T88 793 aaPredicted RBP9.57□□□□□ -0.88
DDX39B-217ENST00000474961 ADGRE3Q9BY15 652 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 RSPH9Q9H1X1 276 aaPredicted RBP9.57□□□□□ -0.88
DDX39B-217ENST00000474961 BFARQ9NZS9 450 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 SARDHQ9UL12 918 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 PPM1HQ9ULR3 514 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 MMP17Q9ULZ9 603 aa9.57□□□□□ -0.88
DDX39B-217ENST00000474961 A0A1W2PQ67 120 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 TSPAN11A1L157 253 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 SDR42E2A6NKP2 422 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 CHURC1-FNTBB4DL54 471 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 ANKRD66B4E2M5 251 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 E7ESA3 106 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 C1QTNF3-AMACRE9PGA6 284 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 KPNA3O00505 521 aaPredicted RBP9.56□□□□□ -0.88
DDX39B-217ENST00000474961 EIF3HO15372 352 aaKnown RBP eCLIP9.56□□□□□ -0.88
DDX39B-217ENST00000474961 RNASEH1O60930 286 aaKnown RBP9.56□□□□□ -0.88
DDX39B-217ENST00000474961 ZIC2O95409 532 aaPredicted RBP9.56□□□□□ -0.88
DDX39B-217ENST00000474961 CPP00450 1065 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 IL1BP01584 269 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 ALADP13716 330 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 TIMP2P16035 220 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 CTPS1P17812 591 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 SLC8A1P32418 973 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 COPAP53621 1224 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 EPHB1P54762 984 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 RPL26P61254 145 aaKnown RBP9.56□□□□□ -0.88
DDX39B-217ENST00000474961 SATB1Q01826 763 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 PDIA2Q13087 525 aaKnown RBP9.56□□□□□ -0.88
DDX39B-217ENST00000474961 MSLNQ13421 630 aaPredicted RBP9.56□□□□□ -0.88
DDX39B-217ENST00000474961 BRD3Q15059 726 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 POM121L1PQ3SYA9 428 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 DNAJC21Q5F1R6 531 aaKnown RBP9.56□□□□□ -0.88
DDX39B-217ENST00000474961 HP1BP3Q5SSJ5 553 aaPredicted RBP9.56□□□□□ -0.88
DDX39B-217ENST00000474961 DENND2CQ68D51 928 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 ZNF787Q6DD87 383 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 CEP128Q6ZU80 1094 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 CENPUQ71F23 418 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 AGGF1Q8N302 714 aaeCLIP9.56□□□□□ -0.88
DDX39B-217ENST00000474961 MPP5Q8N3R9 675 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 PJA1Q8NG27 643 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 HCAR2Q8TDS4 363 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 AENQ8WTP8 325 aaKnown RBP9.56□□□□□ -0.88
DDX39B-217ENST00000474961 EDAQ92838 391 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 ARRDC3Q96B67 414 aa9.56□□□□□ -0.88
DDX39B-217ENST00000474961 SIGLEC10Q96LC7 697 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms