RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 MARCH2Q9P0N8 246 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 MARCH4Q9P2E8 410 aaPredicted RBP12.52□□□□□ -0.41
RNF220-211ENST00000474956 XPR1Q9UBH6 696 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 VPS28Q9UK41 221 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 FIS1Q9Y3D6 152 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 TCAF1Q9Y4C2 921 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 PCDHB5Q9Y5E4 795 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 FAM95CA0A1B0GW59 222 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 TRIM13O60858 407 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 CRTAMO95727 393 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 ATF6P18850 670 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 EPHA3P29320 983 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 ATN1P54259 1190 aaPredicted RBP12.52□□□□□ -0.41
RNF220-211ENST00000474956 FAM189BP81408 668 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 PPM1LQ5SGD2 360 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 PIM3Q86V86 326 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 SCML4Q8N228 414 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 TDRD5Q8NAT2 981 aaKnown RBP12.52□□□□□ -0.41
RNF220-211ENST00000474956 ELMO2Q96JJ3 720 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 RPRD1AQ96P16 312 aaPredicted RBP12.52□□□□□ -0.41
RNF220-211ENST00000474956 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.52□□□□□ -0.41
RNF220-211ENST00000474956 AP4B1Q9Y6B7 739 aa12.52□□□□□ -0.41
RNF220-211ENST00000474956 PLXNA3P51805 1871 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 TSPAN8P19075 237 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 HDCP19113 662 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 PIK3R1P27986 724 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 SERPINB5P36952 375 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 GRIA4P48058 902 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 SGSHP51688 502 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 COG7P83436 770 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 GALNT3Q14435 633 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 NADK2Q4G0N4 442 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 BNC2Q6ZN30 1099 aaPredicted RBP12.51□□□□□ -0.41
RNF220-211ENST00000474956 SETD3Q86TU7 594 aaPredicted RBP12.51□□□□□ -0.41
RNF220-211ENST00000474956 ABI1Q8IZP0 508 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 SNX31Q8N9S9 440 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 RP9Q8TA86 221 aaKnown RBP12.51□□□□□ -0.41
RNF220-211ENST00000474956 WBP2Q969T9 261 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 ILKAPQ9H0C8 392 aaPredicted RBP12.51□□□□□ -0.41
RNF220-211ENST00000474956 ZNF696Q9H7X3 374 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 AAR2Q9Y312 384 aaKnown RBP12.51□□□□□ -0.41
RNF220-211ENST00000474956 REV3LO60673 3130 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 SZT2Q5T011 3432 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 FGF10O15520 208 aaPredicted RBP12.51□□□□□ -0.41
RNF220-211ENST00000474956 GJB5O95377 273 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 EOMESO95936 686 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 PYGLP06737 847 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 YWHAQP27348 245 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 SLC6A4P31645 630 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 HSPA13P48723 471 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 CSRP3P50461 194 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 MRPS22P82650 360 aaKnown RBP12.51□□□□□ -0.41
RNF220-211ENST00000474956 ANO4Q32M45 955 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 ARL13AQ5H913 290 aaPredicted RBP12.51□□□□□ -0.41
RNF220-211ENST00000474956 KLHDC10Q6PID8 442 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 SNX32Q86XE0 403 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 DSELQ8IZU8 1212 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 OR13J1Q8NGT2 312 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 GPR78Q96P69 363 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 NUF2Q9BZD4 464 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 RHOJQ9H4E5 214 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 TREX1Q9NSU2 369 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 UXTQ9UBK9 157 aaPredicted RBP12.51□□□□□ -0.41
RNF220-211ENST00000474956 ZDHHC2Q9UIJ5 367 aa12.51□□□□□ -0.41
RNF220-211ENST00000474956 CCDC160A6NGH7 325 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 SLC22A2O15244 555 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 DLX3O60479 287 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 PQBP1O60828 265 aaKnown RBP12.5□□□□□ -0.41
RNF220-211ENST00000474956 SLC4A1P02730 911 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 MPOP05164 745 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 TICAM1Q8IUC6 712 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 ALDH16A1Q8IZ83 802 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 DCP1BQ8IZD4 617 aaKnown RBP12.5□□□□□ -0.41
RNF220-211ENST00000474956 CCNYL1Q8N7R7 359 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 DDI1Q8WTU0 396 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 ANKRD49Q8WVL7 239 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 DLG3Q92796 817 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 CAPNS2Q96L46 248 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 CDRT15Q96T59 188 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 ZYG11BQ9C0D3 744 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 RIMS3Q9UJD0 308 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 MID2Q9UJV3 735 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 DMTF1Q9Y222 760 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 ARL5AQ9Y689 179 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 ARHGAP10A1A4S6 786 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 INPPL1O15357 1258 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 ANXA9O76027 345 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 HNRNPLP14866 589 aaKnown RBP eCLIP12.5□□□□□ -0.413e-9■■□□□ 13.5
RNF220-211ENST00000474956 ADSLP30566 484 aaPredicted RBP12.5□□□□□ -0.41
RNF220-211ENST00000474956 HK2P52789 917 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 THOP1P52888 689 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 ZNF423Q2M1K9 1284 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 PIGGQ5H8A4 983 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 DEFB128Q7Z7B8 93 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 LSMEM2Q8N112 164 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 PPHLN1Q8NEY8 458 aaKnown RBP12.5□□□□□ -0.41
RNF220-211ENST00000474956 HEXDCQ8WVB3 486 aa12.5□□□□□ -0.41
RNF220-211ENST00000474956 RBM38Q9H0Z9 239 aaKnown RBP12.5□□□□□ -0.41
RNF220-211ENST00000474956 SP110Q9HB58 689 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms