RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 GON4LQ3T8J9 2241 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 A0A0J9YYE9 177 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 ANKRD66B4E2M5 251 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 LATO43561 262 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 EPN2O95208 641 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 TRBC1P01850 177 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 ACTN2P35609 894 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 HNF1BP35680 557 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 MMP12P39900 470 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 PAFAH1B1P43034 410 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 LIG3P49916 1009 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 RALGDSQ12967 914 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 QPCTQ16769 361 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 ZNF284Q2VY69 593 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 TMEM259Q4ZIN3 620 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 FAXCQ5TGI0 409 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 CCDC137Q6PK04 289 aaKnown RBP18.21■□□□□ 0.51
SNRPB-203ENST00000474384 DPPA4Q7L190 304 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 DNASE2BQ8WZ79 361 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 ZNF592Q92610 1267 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 ORAI3Q9BRQ5 295 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 RNF14Q9UBS8 474 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 PILRBQ9UKJ0 227 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 AAR2Q9Y312 384 aaKnown RBP18.21■□□□□ 0.51
SNRPB-203ENST00000474384 DOCK9Q9BZ29 2069 aa18.21■□□□□ 0.51
SNRPB-203ENST00000474384 TNRC6BQ9UPQ9 1833 aaKnown RBP18.21■□□□□ 0.51
SNRPB-203ENST00000474384 A0A0U1RQS6 177 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 LOC285095A0A1B0GVY8 99 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 A0A1W2PPC4 97 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 NPIPB15A6NHN6 443 aaPredicted RBP18.2■□□□□ 0.5
SNRPB-203ENST00000474384 SLC31A1O15431 190 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 NDST3O95803 873 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 RETP07949 1114 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 CYP2A6P11509 494 aaPredicted RBP18.2■□□□□ 0.5
SNRPB-203ENST00000474384 NFKBIAP25963 317 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 CD27P26842 260 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 VIPR1P32241 457 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 RPL22P35268 128 aaKnown RBP18.2■□□□□ 0.5
SNRPB-203ENST00000474384 GRIA4P48058 902 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 CCDC70Q6NSX1 233 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 USP45Q70EL2 814 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 ZSCAN30Q86W11 494 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 MCCC1Q96RQ3 725 aaPredicted RBP18.2■□□□□ 0.5
SNRPB-203ENST00000474384 FICDQ9BVA6 458 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 SLC17A9Q9BYT1 436 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 GMEB2Q9UKD1 530 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 SLCO1B1Q9Y6L6 691 aa18.2■□□□□ 0.5
SNRPB-203ENST00000474384 GPR179Q6PRD1 2367 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 ZFHX2Q9C0A1 2572 aaPredicted RBP18.19■□□□□ 0.5
SNRPB-203ENST00000474384 PAK4O96013 591 aaPredicted RBP18.19■□□□□ 0.5
SNRPB-203ENST00000474384 AGTP01019 485 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 EPOP01588 193 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 TNNT3P45378 269 aaPredicted RBP18.19■□□□□ 0.5
SNRPB-203ENST00000474384 LMNB2Q03252 620 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 SGCGQ13326 291 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 OLIG2Q13516 323 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 FGL2Q14314 439 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 SPARCL1Q14515 664 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 TRIP13Q15645 432 aaPredicted RBP18.19■□□□□ 0.5
SNRPB-203ENST00000474384 CCDC6Q16204 474 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 SETMARQ53H47 684 aaPredicted RBP18.19■□□□□ 0.5
SNRPB-203ENST00000474384 CRTC1Q6UUV9 634 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 LIPIQ6XZB0 460 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 ASCL5Q7RTU5 278 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 TSPAN33Q86UF1 283 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 SYT12Q8IV01 421 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 ZCCHC9Q8N567 271 aaKnown RBP18.19■□□□□ 0.5
SNRPB-203ENST00000474384 SLC25A41Q8N5S1 370 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 C1orf216Q8TAB5 229 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 PPP1R2P1Q96PQ5 205 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 TRPM6Q9BX84 2022 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 C1QTNF2Q9BXJ5 285 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 FSD1LQ9BXM9 530 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 DDX47Q9H0S4 455 aaKnown RBP18.19■□□□□ 0.5
SNRPB-203ENST00000474384 ETNK1Q9HBU6 452 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 PAK5Q9P286 719 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 NCDNQ9UBB6 729 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 TPX2Q9ULW0 747 aaKnown RBP18.19■□□□□ 0.5
SNRPB-203ENST00000474384 COQ6Q9Y2Z9 468 aa18.19■□□□□ 0.5
SNRPB-203ENST00000474384 CAPN8A6NHC0 703 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 GOLGA8CPA6NN73 597 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 KIF2AO00139 706 aaPredicted RBP18.18■□□□□ 0.5
SNRPB-203ENST00000474384 WNT9AO14904 365 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 LZTS3O60299 673 aaPredicted RBP18.18■□□□□ 0.5
SNRPB-203ENST00000474384 TM7SF2O76062 418 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 HEXIM1O94992 359 aaKnown RBP18.18■□□□□ 0.5
SNRPB-203ENST00000474384 TUBB4AP04350 444 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 ATXN1LP0C7T5 689 aaKnown RBP18.18■□□□□ 0.5
SNRPB-203ENST00000474384 ELFN1P0C7U0 828 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 PIRTP0C851 137 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 C6P13671 934 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 LHCGRP22888 699 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 ADRA1AP35348 466 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 MPLP40238 635 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 CHRNA4P43681 627 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 FNTAP49354 379 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 CNGA3Q16281 694 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 SIRPB2Q5JXA9 342 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 DENND2CQ68D51 928 aa18.18■□□□□ 0.5
SNRPB-203ENST00000474384 KLHDC8BQ8IXV7 354 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms