RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 MOV10L1Q9BXT6 1211 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 ALOXE3Q9BYJ1 711 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 SEMA4CQ9C0C4 833 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 ABHD16BQ9H3Z7 469 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 MROH8Q9H579 483 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CLIC5Q9NZA1 410 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 HSFX1Q9UBD0 423 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 RNF7Q9UBF6 113 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 TESQ9UGI8 421 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 RAB21Q9UL25 225 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 VPS4AQ9UN37 437 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 PCDHA10Q9Y5I2 948 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CYP46A1Q9Y6A2 500 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 RPS6KL1Q9Y6S9 549 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 FPGT-TNNI3KV9GXZ4 949 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 ITPR2Q14571 2701 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 C2orf16Q68DN1 1984 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 NF1P21359 2839 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 ASTN1O14525 1302 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SPENQ96T58 3664 aaKnown RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 USP9YO00507 2555 aaPredicted RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 KANSL1LA0AUZ9 987 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 A1L4Q6 167 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 CCDC78A2IDD5 438 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 PI4KAP2A4QPH2 592 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 VWA3AA6NCI4 1184 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 PABPN1LA6NDY0 278 aaKnown RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 AGAP5A6NIR3 686 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 TSPY2A6NKD2 308 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SAC3D1A6NKF1 404 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SHISA7A6NL88 538 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 C4orf47A7E2U8 309 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 LEFTY2O00292 366 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 CES2O00748 559 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 PER2O15055 1255 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 PPM1DO15297 605 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 HNRNPRO43390 633 aaKnown RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 TMCC2O75069 709 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 TSPAN9O75954 239 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 EPN2O95208 641 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SNAI1O95863 264 aaPredicted RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 PCCAP05165 728 aaPredicted RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 SPARCP09486 303 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 TSPY3P0CV98 308 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 TSPY8P0CW00 308 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 CREB1P16220 341 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 ALOX12P18054 663 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 NFKBIAP25963 317 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 ABCD3P28288 659 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 CXCR5P32302 372 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 PSMC2P35998 433 aaKnown RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 GGT5P36269 586 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 LIPAP38571 399 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 PBX1P40424 430 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 MTHFRP42898 656 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 GYG1P46976 350 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 CLK3P49761 638 aaKnown RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 CCR5P51681 352 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SEC24CP53992 1094 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SUMO2P61956 95 aaKnown RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 TSPY1Q01534 308 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 OCA2Q04671 838 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 GOLGA8DPQ0D2H9 430 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 NEXNQ0ZGT2 675 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 RESTQ13127 1097 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 NAA25Q14CX7 972 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 NONOQ15233 471 aaKnown RBP eCLIP2.49□□□□□ -2.01
CALD1-216ENST00000473714 SEC23BQ15437 767 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 DUSP6Q16828 381 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 GEN1Q17RS7 908 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SHROOM1Q2M3G4 852 aaPredicted RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 LRRC24Q50LG9 513 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 ZNF484Q5JVG2 852 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 METTL24Q5JXM2 366 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 TTC22Q5TAA0 569 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SLC9C2Q5TAH2 1124 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 LIPMQ5VYY2 423 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SLC9A4Q6AI14 798 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SP5Q6BEB4 398 aaPredicted RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 CCDC144NLQ6NUI1 221 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 KCNV1Q6PIU1 500 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 DCLRE1AQ6PJP8 1040 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 PIK3AP1Q6ZUJ8 805 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 GDF7Q7Z4P5 450 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 ANKS1BQ7Z6G8 1248 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 ADGRG6Q86SQ4 1221 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SYT12Q8IV01 421 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 DIS3L2Q8IYB7 885 aaKnown RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 ADGRG5Q8IZF4 528 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 MYOCDQ8IZQ8 938 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 TAGAPQ8N103 731 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 LRRC71Q8N4P6 559 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SUN3Q8TAQ9 357 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 CAGE1Q8TC20 777 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 ATG4AQ8WYN0 398 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D5Q92609 795 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 CENPIQ92674 756 aaPredicted RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 KCNJ9Q92806 393 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 GLG1Q92896 1179 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 R3HDM4Q96D70 268 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms