RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ITGB1P05556 798 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 CKMT2P17540 419 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 FAM83EQ2M2I3 478 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 KLC3Q6P597 504 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 POTEHQ6S545 545 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 AGMOQ6ZNB7 445 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 ALDH16A1Q8IZ83 802 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 SLC45A3Q96JT2 553 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 FAR2Q96K12 515 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 FCRL2Q96LA5 508 aaPredicted RBP21.21■□□□□ 0.99
COL18A1-207ENST00000473212 IL12RB2Q99665 862 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 LIN28AQ9H9Z2 209 aaKnown RBP21.21■□□□□ 0.99
COL18A1-207ENST00000473212 EML4Q9HC35 981 aaKnown RBP21.21■□□□□ 0.99
COL18A1-207ENST00000473212 OLAHQ9NV23 265 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 RSL24D1Q9UHA3 163 aaKnown RBP21.21■□□□□ 0.99
COL18A1-207ENST00000473212 C17orf102A2RUQ5 167 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 ZNF839A8K0R7 811 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 H3BNH8 94 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 TIPRLO75663 272 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 ZNF865P0CJ78 1059 aaPredicted RBP21.21■□□□□ 0.99
COL18A1-207ENST00000473212 CCNCP24863 283 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 PFKPQ01813 784 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 AFAP1L2Q8N4X5 818 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 GAB3Q8WWW8 586 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 CROTQ9UKG9 612 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 CDH9Q9ULB4 789 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 MYRFQ9Y2G1 1151 aa21.21■□□□□ 0.99
COL18A1-207ENST00000473212 C9JVG2 144 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 GJB3O75712 270 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 CCDC166P0CW27 439 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 PAMP19021 973 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 CACNB2Q08289 660 aaPredicted RBP21.2■□□□□ 0.98
COL18A1-207ENST00000473212 NEPROQ6NW34 567 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 KLHL5Q96PQ7 755 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 RRN3Q9NYV6 651 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 TMEM181Q9P2C4 612 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 GIMAP2Q9UG22 337 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 HEMK1Q9Y5R4 338 aaPredicted RBP21.2■□□□□ 0.98
COL18A1-207ENST00000473212 PTGDR2Q9Y5Y4 395 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 HTTP42858 3142 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 UBFD1O14562 309 aaKnown RBP21.2■□□□□ 0.98
COL18A1-207ENST00000473212 HTRA2O43464 458 aaPredicted RBP21.2■□□□□ 0.98
COL18A1-207ENST00000473212 NRP2O60462 931 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 SRP72O76094 671 aaKnown RBP21.2■□□□□ 0.98
COL18A1-207ENST00000473212 SLC7A2P52569 658 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 PSMD5Q16401 504 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 TMEM207Q6UWW9 146 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 CYHR1Q6ZMK1 362 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 TFAP2DQ7Z6R9 452 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 PIM3Q86V86 326 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 PBXIP1Q96AQ6 731 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 CSNK1G1Q9HCP0 422 aa21.2■□□□□ 0.98
COL18A1-207ENST00000473212 FNDC1Q4ZHG4 1894 aaPredicted RBP21.2■□□□□ 0.98
COL18A1-207ENST00000473212 UNCXA6NJT0 531 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 IRAK2O43187 625 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 B3GAT3O94766 335 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 OR4Q2P0C623 313 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 ZNF135P52742 658 aaPredicted RBP21.19■□□□□ 0.98
COL18A1-207ENST00000473212 NDST2P52849 883 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 NME5P56597 212 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 MYBPC3Q14896 1274 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 SAMD4BQ5PRF9 694 aaKnown RBP21.19■□□□□ 0.98
COL18A1-207ENST00000473212 AGAP9Q5VTM2 703 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 SDHAF4Q5VUM1 108 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 RANBP10Q6VN20 620 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 ZBTB49Q6ZSB9 765 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 RMND5BQ96G75 393 aaPredicted RBP21.19■□□□□ 0.98
COL18A1-207ENST00000473212 SLC25A23Q9BV35 468 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 PNPLA3Q9NST1 481 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 IPO11Q9UI26 975 aaKnown RBP21.19■□□□□ 0.98
COL18A1-207ENST00000473212 PTCH2Q9Y6C5 1203 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 PPP6CO00743 305 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 RPL10P27635 214 aaKnown RBP21.19■□□□□ 0.98
COL18A1-207ENST00000473212 ALDH3B2P48448 385 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 GEMP55040 296 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 CDH15P55291 814 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 YBX1P67809 324 aaKnown RBP21.19■□□□□ 0.98
COL18A1-207ENST00000473212 KIAA0930Q6ICG6 404 aaPredicted RBP21.19■□□□□ 0.98
COL18A1-207ENST00000473212 LPCAT2Q7L5N7 544 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 UHRF1Q96T88 793 aaPredicted RBP21.19■□□□□ 0.98
COL18A1-207ENST00000473212 TRAF6Q9Y4K3 522 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 KCTD3Q9Y597 815 aa21.19■□□□□ 0.98
COL18A1-207ENST00000473212 A0A0J9YVX5 310 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 SOCS2O14508 198 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 MATN3O15232 486 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 LTA4HP09960 611 aaKnown RBP21.18■□□□□ 0.98
COL18A1-207ENST00000473212 GRIA3P42263 894 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 ARSDP51689 593 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 WNT3AP56704 352 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 ZNF33AQ06730 810 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 PTPRCAPQ14761 206 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 UPP1Q16831 310 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 DHFR2Q86XF0 187 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 TMEM86AQ8N2M4 240 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 CANT1Q8WVQ1 401 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 EXT2Q93063 718 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 CCDC126Q96EE4 140 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 DUS3LQ96G46 650 aaKnown RBP21.18■□□□□ 0.98
COL18A1-207ENST00000473212 LRCH3Q96II8 777 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 EFHD1Q9BUP0 239 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms