RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 DDA1Q9BW61 102 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 TWSG1Q9GZX9 223 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 FGF22Q9HCT0 170 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 SPATS2LQ9NUQ6 558 aaKnown RBP6.92□□□□□ -1.3
HDAC1-204ENST00000471488 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.92□□□□□ -1.33e-8■■□□□ 12.7
HDAC1-204ENST00000471488 USP25Q9UHP3 1055 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 STAP1Q9ULZ2 295 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 OAS3Q9Y6K5 1087 aaKnown RBP6.92□□□□□ -1.3
HDAC1-204ENST00000471488 SPTBN1Q01082 2364 aaKnown RBP6.91□□□□□ -1.3
HDAC1-204ENST00000471488 ARHGAP10A1A4S6 786 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 PIPSLA2A3N6 862 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 A6NCN8 305 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 AREL1O15033 823 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 INPP4BO15327 924 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 INSIG1O15503 277 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 RFPL1O75677 317 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 ZMPSTE24O75844 475 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 DNAJB5O75953 348 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 GSRP00390 522 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 F13A1P00488 732 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 GLI1P08151 1106 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 ZSCAN22P10073 491 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-204ENST00000471488 TIMP2P16035 220 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 POU3F2P20265 443 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-204ENST00000471488 KELP23276 732 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 CD1CP29017 333 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 MAN1A1P33908 653 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 KRT9P35527 623 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 LIMK2P53671 638 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 PMS1P54277 932 aaKnown RBP6.91□□□□□ -1.3
HDAC1-204ENST00000471488 GEMIN4P57678 1058 aaKnown RBP6.91□□□□□ -1.3
HDAC1-204ENST00000471488 SNX16P57768 344 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 RAB15P59190 212 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 SLC6A3Q01959 620 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 PTK2Q05397 1052 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 PNOCQ13519 176 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 ACOX1Q15067 660 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 CDO1Q16878 200 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 NADK2Q4G0N4 442 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 FAM102AQ5T9C2 384 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-204ENST00000471488 KLHL10Q6JEL2 608 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 GJB7Q6PEY0 223 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 CEACAM20Q6UY09 585 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 TMEM135Q86UB9 458 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 TP53INP2Q8IXH6 220 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 GALNT11Q8NCW6 608 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 OR4D9Q8NGE8 314 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 NCSTNQ92542 709 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 FUBP1Q96AE4 644 aaKnown RBP6.91□□□□□ -1.3
HDAC1-204ENST00000471488 MOCOSQ96EN8 888 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 SPATA32Q96LK8 384 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 KREMEN1Q96MU8 473 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 SLC38A3Q99624 504 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 MFRPQ9BY79 579 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 GSDMCQ9BYG8 508 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 ZNF768Q9H5H4 540 aaKnown RBP6.91□□□□□ -1.3
HDAC1-204ENST00000471488 APMAPQ9HDC9 416 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 PCDH12Q9NPG4 1184 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 ARHGEF38Q9NXL2 777 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 RRN3Q9NYV6 651 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 TAAR2Q9P1P5 351 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 TLK1Q9UKI8 766 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 PILRAQ9UKJ1 303 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 KCTD3Q9Y597 815 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 PCDHGA3Q9Y5H0 932 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 KCNMB2Q9Y691 235 aa6.91□□□□□ -1.3
HDAC1-204ENST00000471488 ANKRD36A6QL64 1941 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 PRSS38A1L453 326 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 DRGXA6NNA5 263 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 I6L893 689 aaPredicted RBP6.9□□□□□ -1.3
HDAC1-204ENST00000471488 POLR1CO15160 346 aaPredicted RBP6.9□□□□□ -1.3
HDAC1-204ENST00000471488 RAMP2O60895 175 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 TMCC1O94876 653 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 CLDN1O95832 211 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 CD160O95971 181 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 FGF1P05230 155 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 ELFN1P0C7U0 828 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 CCNB1P14635 433 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 CMA1P23946 247 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 CASP14P31944 242 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 CSF2RBP32927 897 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 ETFBP38117 255 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 RPL34P49207 117 aaKnown RBP6.9□□□□□ -1.3
HDAC1-204ENST00000471488 CXCR3P49682 368 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 ATP11AP98196 1134 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 GCNT1Q02742 428 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 CHAF1BQ13112 559 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 MTM1Q13496 603 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 EIF4EBP2Q13542 120 aaPredicted RBP6.9□□□□□ -1.3
HDAC1-204ENST00000471488 TRA2AQ13595 282 aaKnown RBP eCLIP6.9□□□□□ -1.37e-6■■■■□ 25.8
HDAC1-204ENST00000471488 C5orf22Q49AR2 442 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 TMEM52BQ4KMG9 183 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 PRR30Q53SZ7 412 aaPredicted RBP6.9□□□□□ -1.3
HDAC1-204ENST00000471488 C2CD6Q53TS8 623 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 TCTN3Q6NUS6 607 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 OGFOD3Q6PK18 319 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 OLFML1Q6UWY5 402 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 ZNF783Q6ZMS7 281 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 KRBA2Q6ZNG9 492 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 MARK2Q7KZI7 788 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms