RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 EBNA1BP2Q99848 306 aaKnown RBP9.93□□□□□ -0.82
SF3A1-207ENST00000471342 COL25A1Q9BXS0 654 aaPredicted RBP9.93□□□□□ -0.82
SF3A1-207ENST00000471342 RAB17Q9H0T7 212 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 PABPC3Q9H361 631 aaKnown RBP9.93□□□□□ -0.82
SF3A1-207ENST00000471342 ZDHHC6Q9H6R6 413 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 MAGEE1Q9HCI5 957 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 PRMT8Q9NR22 394 aaPredicted RBP9.93□□□□□ -0.82
SF3A1-207ENST00000471342 CHRAC1Q9NRG0 131 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 FAM114A2Q9NRY5 505 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 NINJ2Q9NZG7 142 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 IL17CQ9P0M4 197 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 MBD1Q9UIS9 605 aaPredicted RBP9.93□□□□□ -0.82
SF3A1-207ENST00000471342 RPL26L1Q9UNX3 145 aaKnown RBP9.93□□□□□ -0.82
SF3A1-207ENST00000471342 SIT1Q9Y3P8 196 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 ARL5AQ9Y689 179 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 NFS1Q9Y697 457 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 SLCO1B1Q9Y6L6 691 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 ATG2BQ96BY7 2078 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 CAPN8A6NHC0 703 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 AGAP14A8MT82 685 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 PSMD3O43242 534 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 BNIP3LO60238 219 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 STK10O94804 968 aaKnown RBP9.92□□□□□ -0.82
SF3A1-207ENST00000471342 CLDN7O95471 211 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 ADRB3P13945 408 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 NMBRP28336 390 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 GABRB3P28472 473 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 ELK3P41970 407 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 MAPK8P45983 427 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 GRIA4P48058 902 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 CLCN5P51795 746 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 STC1P52823 247 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 ST8SIA6P61647 398 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 TUBB4BP68371 445 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 ITKQ08881 620 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 PEX6Q13608 980 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 CNGA3Q16281 694 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 TMEM259Q4ZIN3 620 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 CCDC38Q502W7 563 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 EOGTQ5NDL2 527 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 HP1BP3Q5SSJ5 553 aaPredicted RBP9.92□□□□□ -0.82
SF3A1-207ENST00000471342 ARMC12Q5T9G4 340 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 TRMT10BQ6PF06 316 aaKnown RBP9.92□□□□□ -0.82
SF3A1-207ENST00000471342 BRAT1Q6PJG6 821 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 CES3Q6UWW8 571 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 XKR5Q6UX68 686 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 LIPIQ6XZB0 460 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 UNC5AQ6ZN44 842 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 ERN2Q76MJ5 926 aaKnown RBP9.92□□□□□ -0.82
SF3A1-207ENST00000471342 PCGF5Q86SE9 256 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 IFT20Q8IY31 132 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 LPCAT1Q8NF37 534 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 BRSK1Q8TDC3 778 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 NSMCE1Q8WV22 266 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 IFT81Q8WYA0 676 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 UBXN4Q92575 508 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 CAVIN3Q969G5 261 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 MFSD3Q96ES6 412 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 SHDQ96IW2 340 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 KLF6Q99612 283 aaPredicted RBP9.92□□□□□ -0.82
SF3A1-207ENST00000471342 OSBPL1AQ9BXW6 950 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 FAM129AQ9BZQ8 928 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 ATP13A3Q9H7F0 1226 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 ZNF446Q9NWS9 450 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 EURLQ9NYK6 297 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 FBXL21Q9UKT6 434 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 RIMKLBQ9ULI2 386 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 CNOT6Q9ULM6 557 aaKnown RBP9.92□□□□□ -0.82
SF3A1-207ENST00000471342 PHTF1Q9UMS5 762 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 SOX13Q9UN79 622 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 TTLL3Q9Y4R7 772 aa9.92□□□□□ -0.82
SF3A1-207ENST00000471342 A0A1W2PP55 124 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 HMX2A2RU54 273 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 CXorf49A8MYA2 514 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-207ENST00000471342 UPK3BL1B0FP48 263 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 UPK3BL2E5RIL1 263 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 H7C0S8 307 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 SMAPO00193 183 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 CCL22O00626 93 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 EIF3HO15372 352 aaKnown RBP eCLIP9.91□□□□□ -0.82
SF3A1-207ENST00000471342 GPR39O43194 453 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 PLRG1O43660 514 aaKnown RBP9.91□□□□□ -0.82
SF3A1-207ENST00000471342 BUD23O43709 281 aaKnown RBP9.91□□□□□ -0.82
SF3A1-207ENST00000471342 AP1G1O43747 822 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 ABCB7O75027 752 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 PIAS1O75925 651 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 PRNPP04156 253 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 FGF1P05230 155 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 F7P08709 466 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-207ENST00000471342 PRSS56P0CW18 603 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 C5AR1P21730 350 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 ACSL1P33121 698 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 NNMTP40261 264 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 NPY2RP49146 381 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 TPMTP51580 245 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 SESN2P58004 480 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-207ENST00000471342 CDH17Q12864 832 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 SEMA3AQ14563 771 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 GRM3Q14832 879 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 ANKRD20A4Q4UJ75 823 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms