RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 SEPT10Q9P0V9 454 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 UBA2Q9UBT2 640 aaPredicted RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 RSPH14Q9UHP6 348 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 VPS28Q9UK41 221 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 CCL26Q9Y258 94 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 BAHCC1Q9P281 2608 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 KIAA1549LQ6ZVL6 1849 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 HEPACAM2A8MVW5 462 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 KCNK1O00180 336 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 TRDMT1O14717 391 aaKnown RBP6.72□□□□□ -1.33
VAMP3-202ENST00000470357 HOXC11O43248 304 aaPredicted RBP6.72□□□□□ -1.33
VAMP3-202ENST00000470357 DYRK3O43781 588 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 CACNG3O60359 315 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 ECI2O75521 394 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 JCHAINP01591 159 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 APRTP07741 180 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 ZSCAN5DPP0CG00 497 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 ETS1P14921 441 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 TSHRP16473 764 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 CA4P22748 312 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 ITPKAP23677 461 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 GBP2P32456 591 aaPredicted RBP6.72□□□□□ -1.33
VAMP3-202ENST00000470357 MMP13P45452 471 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 IRAK1P51617 712 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 GAD2Q05329 585 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 GPS2Q13227 327 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 MPP3Q13368 585 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 KCNJ11Q14654 390 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 DNAJC21Q5F1R6 531 aaKnown RBP6.72□□□□□ -1.33
VAMP3-202ENST00000470357 BEND6Q5SZJ8 279 aaPredicted RBP6.72□□□□□ -1.33
VAMP3-202ENST00000470357 FYB2Q5VWT5 728 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 RNF219Q5W0B1 726 aaPredicted RBP6.72□□□□□ -1.33
VAMP3-202ENST00000470357 NAPEPLDQ6IQ20 393 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 CXorf57Q6NSI4 855 aaKnown RBP6.72□□□□□ -1.33
VAMP3-202ENST00000470357 RHBDF2Q6PJF5 856 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 ZDHHC24Q6UX98 284 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 Q6ZS46 218 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 TPGS1Q6ZTW0 290 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 CIR1Q86X95 450 aaPredicted RBP6.72□□□□□ -1.33
VAMP3-202ENST00000470357 MFSD6LQ8IWD5 586 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 KIAA2013Q8IYS2 634 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 ADGRG2Q8IZP9 1017 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 CPA6Q8N4T0 437 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 TEX26Q8N6G2 289 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 NAT8LQ8N9F0 302 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 GLIS1Q8NBF1 620 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 FLCNQ8NFG4 579 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 WFIKKN2Q8TEU8 576 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 CPT1BQ92523 772 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 PRCCQ92733 491 aaPredicted RBP6.72□□□□□ -1.33
VAMP3-202ENST00000470357 WBP2Q969T9 261 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 TTC25Q96NG3 672 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 AGAP3Q96P47 875 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 PSKH2Q96QS6 385 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 FCRL5Q96RD9 977 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 FEM1AQ9BSK4 669 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 NAT9Q9BTE0 207 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 CINPQ9BW66 212 aaPredicted RBP6.72□□□□□ -1.33
VAMP3-202ENST00000470357 POLR1EQ9GZS1 481 aaKnown RBP6.72□□□□□ -1.33
VAMP3-202ENST00000470357 SLC25A51Q9H1U9 297 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 SEMA4AQ9H3S1 761 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 C10orf88Q9H8K7 445 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 LRRC40Q9H9A6 602 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 VIPAS39Q9H9C1 493 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 GLOD4Q9HC38 313 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 RBM22Q9NW64 420 aaKnown RBP eCLIP6.72□□□□□ -1.33
VAMP3-202ENST00000470357 SLC8A2Q9UPR5 921 aa6.72□□□□□ -1.33
VAMP3-202ENST00000470357 ASPMQ8IZT6 3477 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.71□□□□□ -1.34
VAMP3-202ENST00000470357 NEDD8-MDP1E9PL57 170 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 CBX4O00257 560 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 TIMM44O43615 452 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 SPAG6O75602 509 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 SUN1O94901 812 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 AP2A1O95782 977 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 DLGAP3O95886 979 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 ASLP04424 464 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 GSTA2P09210 222 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 H2AFB1P0C5Y9 115 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 H2AFB2P0C5Z0 115 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 MYBL2P10244 700 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 ADH5P11766 374 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 LAMP2P13473 410 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 TYRP14679 529 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 PSMC3P17980 439 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 ITGB7P26010 798 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 PSMB4P28070 264 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 ECHS1P30084 290 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 ACVRL1P37023 503 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 NNMTP40261 264 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 SGSHP51688 502 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 PMS2P54278 862 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 EIF3BP55884 814 aaKnown RBP6.71□□□□□ -1.34
VAMP3-202ENST00000470357 NSUN2Q08J23 767 aaKnown RBP eCLIP6.71□□□□□ -1.34
VAMP3-202ENST00000470357 FCHO2Q0JRZ9 810 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 EIF4HQ15056 248 aaKnown RBP6.71□□□□□ -1.34
VAMP3-202ENST00000470357 DHCR24Q15392 516 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 PLEKHG6Q3KR16 790 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 LY6G5CQ5SRR4 150 aa6.71□□□□□ -1.34
VAMP3-202ENST00000470357 ALS2CLQ60I27 953 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms