RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 CNGA3Q16281 694 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 C9orf64Q5T6V5 341 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 ESRP1Q6NXG1 681 aaKnown RBP15.2■□□□□ 0.02
COL4A5-203ENST00000470339 CES3Q6UWW8 571 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 MARK2Q7KZI7 788 aaKnown RBP15.2■□□□□ 0.02
COL4A5-203ENST00000470339 SLC26A11Q86WA9 606 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 CHST14Q8NCH0 376 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 TMIEQ8NEW7 156 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 BLOC1S5Q8TDH9 187 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 DCAKDQ8WVC6 231 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 ARL8AQ96BM9 186 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 ZNF778Q96MU6 729 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 LYSMD1Q96S90 227 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 PAFAH2Q99487 392 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 ZDHHC6Q9H6R6 413 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 SLC2A4RGQ9NR83 387 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 NSMCE4AQ9NXX6 385 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 WASF2Q9Y6W5 498 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 CKAP5Q14008 2032 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 XIRP2A4UGR9 3374 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 LOC730098B7Z3J9 87 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 H3BQF6 201 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 SLC7A4O43246 635 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 BNIP3LO60238 219 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 PRNPP04156 253 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 INHBAP08476 426 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 DRD1P21728 446 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 LPOP22079 712 aaPredicted RBP15.19■□□□□ 0.02
COL4A5-203ENST00000470339 CNTFP26441 200 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 GKP32189 559 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 SLC8A1P32418 973 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 SLCO1A2P46721 670 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 ARCN1P48444 511 aaKnown RBP15.19■□□□□ 0.02
COL4A5-203ENST00000470339 SERPINB9P50453 376 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 ILF2Q12905 390 aaKnown RBP15.19■□□□□ 0.02
COL4A5-203ENST00000470339 TDGQ13569 410 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 ELAVL3Q14576 367 aaKnown RBP15.19■□□□□ 0.02
COL4A5-203ENST00000470339 LGSNQ5TDP6 509 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 NAIF1Q69YI7 327 aaPredicted RBP15.19■□□□□ 0.02
COL4A5-203ENST00000470339 SERPINA13PQ6UXR4 307 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 KCNMB4Q86W47 210 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 CTAGE3PQ8IX95 158 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 LMNTD2Q8IXW0 634 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 KRT222Q8N1A0 295 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 PPM1NQ8N819 430 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 OR8D1Q8WZ84 308 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 TLCD1Q96CP7 247 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 SCRN2Q96FV2 425 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 SGSM3Q96HU1 749 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 CENPHQ9H3R5 247 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 FBRSL1Q9HCM7 1045 aaKnown RBP15.19■□□□□ 0.02
COL4A5-203ENST00000470339 PPANQ9NQ55 473 aaKnown RBP15.19■□□□□ 0.02
COL4A5-203ENST00000470339 SMYD2Q9NRG4 433 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 C20orf96Q9NUD7 363 aaPredicted RBP15.19■□□□□ 0.02
COL4A5-203ENST00000470339 NLE1Q9NVX2 485 aaPredicted RBP15.19■□□□□ 0.02
COL4A5-203ENST00000470339 ZFATQ9P243 1243 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 HCN2Q9UL51 889 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 SPO11Q9Y5K1 396 aa15.19■□□□□ 0.02
COL4A5-203ENST00000470339 CAPN8A6NHC0 703 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 SMIM23A6NLE4 172 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 CXorf49A8MYA2 514 aaPredicted RBP15.18■□□□□ 0.02
COL4A5-203ENST00000470339 K7EQS6 105 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 LEFTY1O75610 366 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 UGT2B4P06133 528 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 ERVK-10P10266 1014 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 SRFP11831 508 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 ABL2P42684 1182 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 SOX9P48436 509 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 SUOXP51687 545 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 ZNF140P52738 457 aaPredicted RBP15.18■□□□□ 0.02
COL4A5-203ENST00000470339 TTMPQ5BVD1 217 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 ZNF805Q5CZA5 627 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 ARSIQ5FYB1 569 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 TMEM196Q5HYL7 178 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 TEDDM1Q5T9Z0 273 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 USP45Q70EL2 814 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 GLT6D1Q7Z4J2 308 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 DSG4Q86SJ6 1040 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 SFTPA1Q8IWL2 248 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 CNTN4Q8IWV2 1026 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 TTC30BQ8N4P2 665 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 PAF1Q8N7H5 531 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 MDGA1Q8NFP4 955 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 OR13J1Q8NGT2 312 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 CALML6Q8TD86 181 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 SCG3Q8WXD2 468 aaKnown RBP15.18■□□□□ 0.02
COL4A5-203ENST00000470339 KLHL32Q96NJ5 620 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 MCCC1Q96RQ3 725 aaPredicted RBP15.18■□□□□ 0.02
COL4A5-203ENST00000470339 CPNE1Q99829 537 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 FAM167BQ9BTA0 163 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 BCCIPQ9P287 314 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL4A5-203ENST00000470339 PIAS3Q9Y6X2 628 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 F5P12259 2224 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 ZNF106Q9H2Y7 1883 aaKnown RBP15.18■□□□□ 0.02
COL4A5-203ENST00000470339 SCN8AQ9UQD0 1980 aa15.18■□□□□ 0.02
COL4A5-203ENST00000470339 IQANK1A0A1B0GTG1 560 aa15.17■□□□□ 0.02
COL4A5-203ENST00000470339 RNF40O75150 1001 aa15.17■□□□□ 0.02
COL4A5-203ENST00000470339 RPP40O75818 363 aaKnown RBP15.17■□□□□ 0.02
COL4A5-203ENST00000470339 VAPBO95292 243 aa15.17■□□□□ 0.02
COL4A5-203ENST00000470339 PIRTP0C851 137 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms