RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 GPSM3Q9Y4H4 160 aa15.13■□□□□ 0.01
LIMS2-213ENST00000469300 DNM1LO00429 736 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 PIRTP0C851 137 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 CCT8P50990 548 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 CAP1Q01518 475 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 ZCWPW1Q9H0M4 648 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 RMI1Q9H9A7 625 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 SEMA4BQ9NPR2 832 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-213ENST00000469300 PLK2Q9NYY3 685 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 CLIC5Q9NZA1 410 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 STYXL1Q9Y6J8 313 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 ARFGEF2Q9Y6D5 1785 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 A0A1B0GW55 424 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 SLC28A1O00337 649 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 DUX4L2P0CJ85 424 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 DUX4L3P0CJ86 424 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 DUX4L4P0CJ87 422 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 DUX4L5P0CJ88 424 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 DUX4L6P0CJ89 424 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 DUX4L7P0CJ90 424 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 PABPC1P11940 636 aaKnown RBP15.12■□□□□ 0.01
LIMS2-213ENST00000469300 RUNX1T1Q06455 604 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 PRSS55Q6UWB4 352 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-213ENST00000469300 ARL14EPQ8N8R7 260 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-213ENST00000469300 SLC22A17Q8WUG5 538 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 KLHL25Q9H0H3 589 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 DUX4Q9UBX2 424 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 ZMYND8Q9ULU4 1186 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TLR6Q9Y2C9 796 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 RAP2CQ9Y3L5 183 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TBC1D3DA0A087WVF3 549 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TBC1D3IA0A087WXS9 549 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TBC1D3EA0A087X179 549 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TBC1D3KA0A087X1G2 549 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 FAM237BA0A1B0GVD1 139 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TBC1D3FA6NER0 549 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TBC1D3LB9A6J9 549 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 UGT2B4P06133 528 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TBC1D3HP0C7X1 549 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 PKMP14618 531 aaKnown RBP15.12■□□□□ 0.01
LIMS2-213ENST00000469300 EDNRBP24530 442 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 S100A5P33763 92 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 SPAM1P38567 509 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 RCN1Q15293 331 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 INTS11Q5TA45 600 aaKnown RBP15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TBC1D3GQ6DHY5 549 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TBC1D3CQ6IPX1 549 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TBC1D3Q8IZP1 549 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-213ENST00000469300 PXYLP1Q8TE99 480 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 ACDQ96AP0 544 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 CREBZFQ9NS37 354 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 SNX13Q9Y5W8 968 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 GLYATL1P3A0A0U1RQE8 302 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 A0A1W2PQ45 241 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-213ENST00000469300 A0A1W2PQY0 241 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 ATP6V1B1P15313 513 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 CCND3P30281 292 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-213ENST00000469300 GABRB2P47870 512 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 GPM6BQ13491 265 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 PPP2R2DQ66LE6 453 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 BHLHB9Q6PI77 547 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TMEM110Q86TL2 294 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 SAPCD2Q86UD0 394 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 TCF12Q99081 682 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 UGT2B28Q9BY64 529 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 ADPRHL2Q9NX46 363 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 MCM8Q9UJA3 840 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 COG5Q9UP83 839 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 AP4S1Q9Y587 144 aa15.12■□□□□ 0.01
LIMS2-213ENST00000469300 YJEFN3A6XGL0 299 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 RASSF9O75901 435 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 ZCCHC18P0CG32 403 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 ME2P23368 584 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 FASP25445 335 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 PDK4Q16654 411 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 LIPMQ5VYY2 423 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 PRCCQ92733 491 aaPredicted RBP15.11■□□□□ 0.01
LIMS2-213ENST00000469300 CLP1Q92989 425 aaKnown RBP15.11■□□□□ 0.01
LIMS2-213ENST00000469300 SDCBP2Q9H190 292 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 MINDY3Q9H8M7 445 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 FZD10Q9ULW2 581 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 SNX8Q9Y5X2 465 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 HDAC3O15379 428 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 AVILO75366 819 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 CCNDBP1O95273 360 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 PCSK2P16519 638 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 ZFP1Q6P2D0 407 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 GPRIN3Q6ZVF9 776 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 HEPHQ9BQS7 1158 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 BDH2Q9BUT1 245 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 SNX15Q9NRS6 342 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 ERVK-21P61565 698 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 CTBP1Q13363 440 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 SPIDRQ14159 915 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 RFWD3Q6PCD5 774 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 RIPOR1Q6ZS17 1223 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 ARNTL2Q8WYA1 636 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 CRYBG1Q9Y4K1 1723 aa15.11■□□□□ 0.01
LIMS2-213ENST00000469300 FAM220BPB1ANY3 271 aa15.1■□□□□ 0.01
LIMS2-213ENST00000469300 AHCYL1O43865 530 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms