RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 WASHC5Q12768 1159 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 TRAF2Q12933 501 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 ZNF211Q13398 564 aaPredicted RBP8.6□□□□□ -1.03
SSBP1-208ENST00000469123 ARHGEF7Q14155 803 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 INAVAQ3KP66 663 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 ZNF569Q5MCW4 686 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 PID1Q7Z2X4 250 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 CNTD1Q8N815 330 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 ATL2Q8NHH9 583 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 PDCD6IPQ8WUM4 868 aaKnown RBP8.6□□□□□ -1.03
SSBP1-208ENST00000469123 PIH1D2Q8WWB5 315 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 TADA1Q96BN2 335 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 IFT43Q96FT9 208 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 SPATA13Q96N96 652 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 AGAP3Q96P47 875 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 EDEM2Q9BV94 578 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 GBA3Q9H227 469 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 PCDH9Q9HC56 1237 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 PARD6AQ9NPB6 346 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 TMEM9BQ9NQ34 198 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 RAD18Q9NS91 495 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 DNAAF2Q9NVR5 837 aaKnown RBP8.6□□□□□ -1.03
SSBP1-208ENST00000469123 SAE1Q9UBE0 346 aaPredicted RBP8.6□□□□□ -1.03
SSBP1-208ENST00000469123 FEZ2Q9UHY8 353 aaPredicted RBP8.6□□□□□ -1.03
SSBP1-208ENST00000469123 CDV3Q9UKY7 258 aaKnown RBP8.6□□□□□ -1.03
SSBP1-208ENST00000469123 TTC7AQ9ULT0 858 aaPredicted RBP8.6□□□□□ -1.03
SSBP1-208ENST00000469123 ZFR2Q9UPR6 939 aaKnown RBP8.6□□□□□ -1.03
SSBP1-208ENST00000469123 PCDHGC4Q9Y5F7 938 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 TP53BP1Q12888 1972 aaPredicted RBP8.6□□□□□ -1.03
SSBP1-208ENST00000469123 DMDP11532 3685 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 PLXNA2O75051 1894 aa8.6□□□□□ -1.03
SSBP1-208ENST00000469123 ATXN2Q99700 1313 aaKnown RBP8.59□□□□□ -1.03
SSBP1-208ENST00000469123 A0A0J9YYE9 177 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 GOLGA6L10A0A0M3HER8 536 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 A0A1W2PR77 199 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 C5orf60A6NFR6 353 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 IGLON5A6NGN9 336 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 CAPN8A6NHC0 703 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 ERI2A8K979 691 aaKnown RBP8.59□□□□□ -1.03
SSBP1-208ENST00000469123 TLR4O00206 839 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 PSMD3O43242 534 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 SPINT1O43278 529 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 LZTS3O60299 673 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-208ENST00000469123 NDST3O95803 873 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 TRBC1P01850 177 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 ITGAVP06756 1048 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 MMP2P08253 660 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 C6P13671 934 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 ENGP17813 658 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 TCP1P17987 556 aaKnown RBP8.59□□□□□ -1.03
SSBP1-208ENST00000469123 HLA-DPA1P20036 260 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 TEAD1P28347 426 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 RBL1P28749 1068 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 MAT2AP31153 395 aaKnown RBP8.59□□□□□ -1.03
SSBP1-208ENST00000469123 ARRB1P49407 418 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-208ENST00000469123 LIG3P49916 1009 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 YPEL5P62699 121 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 IRX4P78413 519 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 CDK18Q07002 472 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 NIPAL4Q0D2K0 466 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 GRIK2Q13002 908 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 PTK2BQ14289 1009 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 SUZ12Q15022 739 aaKnown RBP8.59□□□□□ -1.03
SSBP1-208ENST00000469123 LRRC14Q15048 493 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 LLGL1Q15334 1064 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 CCNG2Q16589 344 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 HS1BP3Q53T59 392 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 ABI3BPQ7Z7G0 1075 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 NLRP8Q86W28 1048 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 KIAA2013Q8IYS2 634 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 NRSN1Q8IZ57 195 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 ZNF567Q8N184 647 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 DCLK2Q8N568 766 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 SLC35B2Q8TB61 432 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 CCHCR1Q8TD31 782 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 RTP4Q96DX8 246 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 KLHDC7BQ96G42 594 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 SLC6A18Q96N87 628 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 RTKNQ9BST9 563 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 MLPHQ9BV36 600 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-208ENST00000469123 FSD1LQ9BXM9 530 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 TRABDQ9H4I3 376 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 GDF3Q9NR23 364 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 HACD3Q9P035 362 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 B4GALT6Q9UBX8 382 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 RSPH14Q9UHP6 348 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 ANKRD6Q9Y2G4 727 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 PCDHGB2Q9Y5G2 931 aa8.59□□□□□ -1.03
SSBP1-208ENST00000469123 GOLGA4Q13439 2230 aaKnown RBP8.59□□□□□ -1.03
SSBP1-208ENST00000469123 A0A1B0GVT2 93 aa8.58□□□□□ -1.04
SSBP1-208ENST00000469123 ANKRD66B4E2M5 251 aa8.58□□□□□ -1.04
SSBP1-208ENST00000469123 PGRMC1O00264 195 aaKnown RBP8.58□□□□□ -1.04
SSBP1-208ENST00000469123 PDE2AO00408 941 aaPredicted RBP8.58□□□□□ -1.04
SSBP1-208ENST00000469123 SLC30A4O14863 429 aa8.58□□□□□ -1.04
SSBP1-208ENST00000469123 WNT9AO14904 365 aa8.58□□□□□ -1.04
SSBP1-208ENST00000469123 SLC31A1O15431 190 aa8.58□□□□□ -1.04
SSBP1-208ENST00000469123 KCNN4O15554 427 aa8.58□□□□□ -1.04
SSBP1-208ENST00000469123 LIASO43766 372 aa8.58□□□□□ -1.04
SSBP1-208ENST00000469123 CEP104O60308 925 aa8.58□□□□□ -1.04
SSBP1-208ENST00000469123 PCDHGA12O60330 932 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms