RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 JRKLQ9Y4A0 524 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 ASB3Q9Y575 518 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 PCDHA3Q9Y5H8 950 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SNX10Q9Y5X0 201 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SAR1BQ9Y6B6 198 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 PLXNA4Q9HCM2 1894 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TSC2P49815 1807 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 GBF1Q92538 1859 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 A0A0G2JNJ9 132 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 GOLGA6L7A0A1B0GV03 622 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 LRRD1A4D1F6 860 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 C2orf78A6NCI8 922 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF840PA6NDX5 716 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 TRDMT1O14717 391 aaKnown RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 DAPK3O43293 454 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 CREB3O43889 395 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 TLR5O60602 858 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 LRCH4O75427 683 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 ZRANB2O95218 330 aaKnown RBP eCLIP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 F9P00740 461 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 RHOP08100 348 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 CD48P09326 243 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 SRGAP2BP0DMP2 458 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 KRT10P13645 584 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 HDCP19113 662 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 KDELR1P24390 212 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 CTNNA2P26232 953 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 CDC25CP30307 473 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 MAN1A1P33908 653 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 ATP5C1P36542 298 aaKnown RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 ADCY8P40145 1251 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 CETN2P41208 172 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 PAFAH1B1P43034 410 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 ETV4P43268 484 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 PTPN9P43378 593 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 KCNC1P48547 511 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 KCNQ1P51787 676 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 HADHBP55084 474 aaKnown RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 MANFP55145 182 aaKnown RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 CDH6P55285 790 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 HDAC4P56524 1084 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 RWDD2BP57060 319 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 DYNLT1P63172 113 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 TOP3AQ13472 1001 aaPredicted RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 ACAP1Q15027 740 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 TEAD2Q15562 447 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 CA9Q16790 459 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 LRIT3Q3SXY7 679 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 ARL13BQ3SXY8 428 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 PABPC1LQ4VXU2 614 aaKnown RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 ARHGAP15Q53QZ3 475 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 BOLA3Q53S33 107 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 PPP6R3Q5H9R7 873 aaPredicted RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 STXBP5Q5T5C0 1151 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 ERMARDQ5T6L9 678 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 SEL1L2Q5TEA6 688 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 PAPD7Q5XG87 772 aaKnown RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 MFSD7Q6UXD7 560 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 GAREM2Q75VX8 874 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 PDZD4Q76G19 769 aaPredicted RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 Q7L0L9 218 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 BMP8AQ7Z5Y6 402 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 TADA2BQ86TJ2 420 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 RFX6Q8HWS3 928 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 RCOR2Q8IZ40 523 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 SCML4Q8N228 414 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 PYROXD2Q8N2H3 581 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 KLHL36Q8N4N3 616 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 CCDC185Q8N715 623 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 CNTD1Q8N815 330 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 VN1R2Q8NFZ6 395 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 OR5AN1Q8NGI8 311 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 HDAC7Q8WUI4 952 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 RAPGEF5Q92565 580 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 HES6Q96HZ4 224 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 LCORQ96JN0 433 aaPredicted RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 PBKQ96KB5 322 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 PEBP4Q96S96 227 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 NPY6RQ99463 290 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 MENTQ9BUN1 341 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 SNRNP25Q9BV90 132 aaKnown RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 TRIM62Q9BVG3 475 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 TTLL2Q9BWV7 592 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 CALN1Q9BXU9 219 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 TKTL2Q9H0I9 626 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 PRO3102Q9H379 93 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 SLITRK6Q9H5Y7 841 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 BARX1Q9HBU1 254 aaPredicted RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 PIGVQ9NUD9 493 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 DDX56Q9NY93 547 aaKnown RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 RRN3Q9NYV6 651 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 HSFX1Q9UBD0 423 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 UXTQ9UBK9 157 aaPredicted RBP4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 Q9UFV3 132 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 DPP7Q9UHL4 492 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC12A6Q9UHW9 1150 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 LCMT1Q9UIC8 334 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 CDH22Q9UJ99 828 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 SNX12Q9UMY4 172 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms