RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 CR2P20023 1033 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 RPIAP49247 311 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 CLDN6P56747 220 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 INPP5AQ14642 412 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 NFATC4Q14934 902 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 PDK2Q15119 407 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 SDR16C5Q8N3Y7 309 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 KCTD6Q8NC69 237 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 MGME1Q9BQP7 344 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 APOOQ9BUR5 198 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 TRIM5Q9C035 493 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 ABCG4Q9H172 646 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 HAUS2Q9NVX0 235 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 KCTD5Q9NXV2 234 aa19.18■□□□□ 0.66
COL7A1-207ENST00000467985 LY6G6EA0A0G2JKS1 128 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 AKR1B10O60218 316 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 OPA1O60313 960 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 MT-CO3P00414 261 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 PRKCGP05129 697 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 ANXA6P08133 673 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 IL4RP24394 825 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 MMP13P45452 471 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 HK3P52790 923 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 ADKP55263 362 aaKnown RBP19.17■□□□□ 0.66
COL7A1-207ENST00000467985 DPYSL3Q14195 570 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 RTP5Q14D33 572 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 ELOCQ15369 112 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 ASTE1Q2TB18 679 aaPredicted RBP19.17■□□□□ 0.66
COL7A1-207ENST00000467985 DEFB133Q30KQ1 61 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 LIPIQ6XZB0 460 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 VSTM4Q8IW00 320 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 RBFAQ8N0V3 343 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 SCG3Q8WXD2 468 aaKnown RBP19.17■□□□□ 0.66
COL7A1-207ENST00000467985 ZNF670Q9BS34 389 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 LRRC61Q9BV99 259 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 CAAP1Q9H8G2 361 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 RAXQ9Y2V3 346 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 GPSM3Q9Y4H4 160 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 U3KQA8 63 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 IGSF10Q6WRI0 2623 aa19.17■□□□□ 0.66
COL7A1-207ENST00000467985 MYLKQ15746 1914 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 GCATO75600 419 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 RECQL5O94762 991 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-207ENST00000467985 RASGRP1O95267 797 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 CPP00450 1065 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 ALPIP09923 528 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 TMEM253P0C7T8 217 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 MAN1A1P33908 653 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 ARSEP51690 589 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 SEMG2Q02383 582 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 RALGDSQ12967 914 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 PAFAH1B3Q15102 231 aaKnown RBP19.16■□□□□ 0.66
COL7A1-207ENST00000467985 NR0B2Q15466 257 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 TIGD7Q6NT04 549 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-207ENST00000467985 LVRNQ6Q4G3 990 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 PGBD5Q8N414 524 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 TPCN2Q8NHX9 752 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 IFI44Q8TCB0 444 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 PDCD6IPQ8WUM4 868 aaKnown RBP19.16■□□□□ 0.66
COL7A1-207ENST00000467985 WDR92Q96MX6 357 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 BOCQ9BWV1 1114 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 TCEAL2Q9H3H9 227 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-207ENST00000467985 NOD2Q9HC29 1040 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 PNMA8BQ9ULN7 279 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-207ENST00000467985 OR1A2Q9Y585 309 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 PCDHGC4Q9Y5F7 938 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 AK5Q9Y6K8 562 aa19.16■□□□□ 0.66
COL7A1-207ENST00000467985 URB1O60287 2271 aaKnown RBP19.16■□□□□ 0.66
COL7A1-207ENST00000467985 CACNB4O00305 520 aaPredicted RBP19.15■□□□□ 0.66
COL7A1-207ENST00000467985 PCCBP05166 539 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 HOXC4P09017 264 aaPredicted RBP19.15■□□□□ 0.66
COL7A1-207ENST00000467985 CD48P09326 243 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 KRT10P13645 584 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 CTSEP14091 401 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 TSHRP16473 764 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 CES1P23141 567 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 KELP23276 732 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 KIAA1024LP59773 190 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 SRP54P61011 504 aaKnown RBP19.15■□□□□ 0.66
COL7A1-207ENST00000467985 GALNT2Q10471 571 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 MMRN1Q13201 1228 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 CDKN3Q16667 212 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 ANKRD20A8PQ5CZ79 823 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 C6orf132Q5T0Z8 1188 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 CDCP2Q5VXM1 449 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 ENPP7Q6UWV6 458 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 HID1Q8IV36 788 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 TEX26Q8N6G2 289 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 MAPK15Q8TD08 544 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 NAT6Q93015 286 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 FATE1Q969F0 183 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 CCDC42Q96M95 316 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 NSMCE3Q96MG7 304 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 DEPDC7Q96QD5 511 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 PACSIN1Q9BY11 444 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 ABHD10Q9NUJ1 306 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 B4GALT6Q9UBX8 382 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 KLQ9UEF7 1012 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 AMACRQ9UHK6 382 aa19.15■□□□□ 0.66
COL7A1-207ENST00000467985 PHTF1Q9UMS5 762 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms