RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 RARBP10826 455 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 GHRP10912 638 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 ACADMP11310 421 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 CHRM3P20309 590 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 S100A1P23297 94 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 TNFRSF8P28908 595 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 GP5P40197 560 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 CCR9P51686 369 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 THOP1P52888 689 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 ATXN3P54252 364 aaPredicted RBP5.79□□□□□ -1.48
LRCH3-212ENST00000466845 IL2P60568 153 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 TSPAN5P62079 268 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 STK4Q13043 487 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 DMC1Q14565 340 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 NONOQ15233 471 aaKnown RBP eCLIP5.79□□□□□ -1.48
LRCH3-212ENST00000466845 NFIL3Q16649 462 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 CCDC142Q17RM4 750 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 DUSP28Q4G0W2 176 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 ZNF805Q5CZA5 627 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 KLHDC7AQ5VTJ3 777 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 NCAPH2Q6IBW4 605 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 CAVIN1Q6NZI2 390 aaKnown RBP5.79□□□□□ -1.48
LRCH3-212ENST00000466845 TRAT1Q6PIZ9 186 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 UNQ6494/PRO21346Q6UXR6 183 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 FKBP9P1Q75LS8 142 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 TAS1R1Q7RTX1 841 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 UBE3BQ7Z3V4 1068 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 COL23A1Q86Y22 540 aaPredicted RBP5.79□□□□□ -1.48
LRCH3-212ENST00000466845 HERC6Q8IVU3 1022 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 FAM217AQ8IXS0 508 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 ANKFN1Q8N957 763 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 CCDC63Q8NA47 563 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 FANCBQ8NB91 859 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 MDGA1Q8NFP4 955 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 GAB3Q8WWW8 586 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 IRGQQ8WZA9 623 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 STAMQ92783 540 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 ZKSCAN4Q969J2 545 aaPredicted RBP5.79□□□□□ -1.48
LRCH3-212ENST00000466845 VPS33AQ96AX1 596 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 FAM120BQ96EK7 910 aaKnown RBP5.79□□□□□ -1.48
LRCH3-212ENST00000466845 TMA16Q96EY4 203 aaKnown RBP5.79□□□□□ -1.48
LRCH3-212ENST00000466845 CYFIP2Q96F07 1278 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 DMRTA2Q96SC8 542 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 PRPF18Q99633 342 aaKnown RBP5.79□□□□□ -1.48
LRCH3-212ENST00000466845 SOX7Q9BT81 388 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 CARD6Q9BX69 1037 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 FRMD8P1Q9BZ68 369 aaPredicted RBP5.79□□□□□ -1.48
LRCH3-212ENST00000466845 SLITRK6Q9H5Y7 841 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 TMEM206Q9H813 350 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 OBP2BQ9NPH6 170 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 ASNSD1Q9NWL6 643 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 SOHLH2Q9NX45 425 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 WWOXQ9NZC7 414 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 LARSQ9P2J5 1176 aaKnown RBP5.79□□□□□ -1.48
LRCH3-212ENST00000466845 SLC7A8Q9UHI5 535 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 TMPRSS11EQ9UL52 423 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 PCDHGA5Q9Y5G8 931 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 DCCP43146 1447 aa5.79□□□□□ -1.48
LRCH3-212ENST00000466845 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.79□□□□□ -1.48
LRCH3-212ENST00000466845 WDR33Q9C0J8 1336 aaKnown RBP5.78□□□□□ -1.48
LRCH3-212ENST00000466845 ARHGEF37A1IGU5 675 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 GOLGA8IPA6NC78 632 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 LGALS16A8MUM7 142 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 KIF28PB7ZC32 967 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 H3BML4 177 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 TRIM38O00635 465 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 HNRNPRO43390 633 aaKnown RBP5.78□□□□□ -1.48
LRCH3-212ENST00000466845 ADAM20O43506 726 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 TRAPPC3O43617 180 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 TBC1D4O60343 1298 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 TLR2O60603 784 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 CTAG2O75638 210 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 ATP5HO75947 161 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 UBXN7O94888 489 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 PCDH8O95206 1070 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 LMNAP02545 664 aaKnown RBP5.78□□□□□ -1.48
LRCH3-212ENST00000466845 THP07101 528 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 TPOP07202 933 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 ADH4P08319 380 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 CHN1P15882 459 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 TSHRP16473 764 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 TBXAS1P24557 533 aaPredicted RBP5.78□□□□□ -1.48
LRCH3-212ENST00000466845 GDI2P50395 445 aaKnown RBP5.78□□□□□ -1.48
LRCH3-212ENST00000466845 ZNF81P51508 661 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 CLCNKAP51800 687 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 METAP1P53582 386 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 SCAND1P57086 179 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 GSDMDP57764 484 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 GPX6P59796 221 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 VAMP2P63027 116 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 MEF2AQ02078 507 aaPredicted RBP5.78□□□□□ -1.48
LRCH3-212ENST00000466845 GCNT1Q02742 428 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 CREMQ03060 361 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 DPTQ07507 201 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 XRCC4Q13426 336 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 GPM6BQ13491 265 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 RPS6KA2Q15349 733 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 CYP2A13Q16696 494 aa5.78□□□□□ -1.48
LRCH3-212ENST00000466845 TIGD6Q17RP2 521 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms