RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 HCAR2Q8TDS4 363 aa13.46□□□□□ -0.26
ATF3-208ENST00000465155 HNRNPLLQ8WVV9 542 aaKnown RBP13.46□□□□□ -0.26
ATF3-208ENST00000465155 ARRDC3Q96B67 414 aa13.46□□□□□ -0.26
ATF3-208ENST00000465155 STAMBPL1Q96FJ0 436 aa13.46□□□□□ -0.26
ATF3-208ENST00000465155 EBNA1BP2Q99848 306 aaKnown RBP13.46□□□□□ -0.26
ATF3-208ENST00000465155 TXLNGYQ9BZA5 131 aa13.46□□□□□ -0.26
ATF3-208ENST00000465155 MKRN2Q9H000 416 aaKnown RBP13.46□□□□□ -0.26
ATF3-208ENST00000465155 SLC6A17Q9H1V8 727 aa13.46□□□□□ -0.26
ATF3-208ENST00000465155 CDC42EP4Q9H3Q1 356 aaKnown RBP13.46□□□□□ -0.26
ATF3-208ENST00000465155 SEMA4AQ9H3S1 761 aa13.46□□□□□ -0.26
ATF3-208ENST00000465155 FBRSQ9HAH7 460 aa13.46□□□□□ -0.26
ATF3-208ENST00000465155 CD248Q9HCU0 757 aa13.46□□□□□ -0.26
ATF3-208ENST00000465155 SPO11Q9Y5K1 396 aa13.46□□□□□ -0.26
ATF3-208ENST00000465155 CCDC78A2IDD5 438 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 CAPN8A6NHC0 703 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 UPK3BL1B0FP48 263 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 CHURC1-FNTBB4DL54 471 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 UPK3BL2E5RIL1 263 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 PLK4O00444 970 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 MID1O15344 667 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 ADH1BP00325 375 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 TIMP2P16035 220 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 XPAP23025 273 aaPredicted RBP13.45□□□□□ -0.26
ATF3-208ENST00000465155 ADRA1DP25100 572 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 HNF1BP35680 557 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 RPS14P62263 151 aaKnown RBP13.45□□□□□ -0.26
ATF3-208ENST00000465155 SIGLEC14Q08ET2 396 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 GAS6Q14393 721 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 CRY1Q16526 586 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 CAPN12Q6ZSI9 719 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 USP45Q70EL2 814 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 GLT6D1Q7Z4J2 308 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 TMPRSS6Q8IU80 811 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 NDUFAF2Q8N183 169 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 BRSK1Q8TDC3 778 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 SCRN2Q96FV2 425 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 CFAP36Q96G28 342 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 TRIM56Q9BRZ2 755 aaKnown RBP13.45□□□□□ -0.26
ATF3-208ENST00000465155 MFSD1Q9H3U5 465 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 MAGEE1Q9HCI5 957 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 CHRAC1Q9NRG0 131 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 NINJ2Q9NZG7 142 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.45□□□□□ -0.26
ATF3-208ENST00000465155 ZC3H7BQ9UGR2 993 aaKnown RBP13.45□□□□□ -0.26
ATF3-208ENST00000465155 PPIL1Q9Y3C6 166 aa13.45□□□□□ -0.26
ATF3-208ENST00000465155 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.45□□□□□ -0.26
ATF3-208ENST00000465155 A0A0U1RQS6 177 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 TCRBV21S2A2A0A5A6 115 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 MAGEB16A2A368 324 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 HEATR9A2RTY3 570 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 A8MX80 341 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 AURKAO14965 403 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 ATG13O75143 517 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 SLC4A1P02730 911 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 PYGBP11216 843 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 PGAM1P18669 254 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 C5AR1P21730 350 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 FAM193AP78312 1265 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 SEMG2Q02383 582 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 KYNUQ16719 465 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 BEND6Q5SZJ8 279 aaPredicted RBP13.44□□□□□ -0.26
ATF3-208ENST00000465155 UBAP2Q5T6F2 1119 aaKnown RBP13.44□□□□□ -0.26
ATF3-208ENST00000465155 FBXL19Q6PCT2 694 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 TRMT10CQ7L0Y3 403 aaKnown RBP13.44□□□□□ -0.26
ATF3-208ENST00000465155 SYT13Q7L8C5 426 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 PALM2Q8IXS6 379 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 MDGA1Q8NFP4 955 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 UBLCP1Q8WVY7 318 aaPredicted RBP13.44□□□□□ -0.26
ATF3-208ENST00000465155 EDAQ92838 391 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 DCBLD2Q96PD2 775 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 RANBP9Q96S59 729 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 NAT9Q9BTE0 207 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 KIFC1Q9BW19 673 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 OSBPL6Q9BZF3 934 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 ARFGAP3Q9NP61 516 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 SOX13Q9UN79 622 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 SIT1Q9Y3P8 196 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 ZNF711Q9Y462 761 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 TCAF1Q9Y4C2 921 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 ARL5AQ9Y689 179 aa13.44□□□□□ -0.26
ATF3-208ENST00000465155 NPIPB15A6NHN6 443 aaPredicted RBP13.43□□□□□ -0.26
ATF3-208ENST00000465155 DCXO43602 365 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 ACSL3O95573 720 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 CRTAMO95727 393 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 TTC4O95801 387 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 DNTTP04053 509 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 ADRB3P13945 408 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 NFKBIAP25963 317 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 SSTR1P30872 391 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 P2RY2P41231 377 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 NEK3P51956 506 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 CNTN1Q12860 1018 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 TAF1AQ15573 450 aaPredicted RBP13.43□□□□□ -0.26
ATF3-208ENST00000465155 CES3Q6UWW8 571 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 ERN2Q76MJ5 926 aaKnown RBP13.43□□□□□ -0.26
ATF3-208ENST00000465155 LYSMD3Q7Z3D4 306 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 CCNJLQ8IV13 435 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 AADATQ8N5Z0 425 aa13.43□□□□□ -0.26
ATF3-208ENST00000465155 PTCD2Q8WV60 388 aaKnown RBP13.43□□□□□ -0.26
ATF3-208ENST00000465155 CLDN23Q96B33 292 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms