RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 DNAJC1Q96KC8 554 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 NSMCE3Q96MG7 304 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 CDRT15Q96T59 188 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 CCDC28BQ9BUN5 200 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 MFSD1Q9H3U5 465 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 ALG9Q9H6U8 611 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 CFLARO15519 480 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 MAP3K13O43283 966 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 NBNO60934 754 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 ENO3P13929 434 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 RAG1P15918 1043 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 SP100P23497 879 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 SLC6A4P31645 630 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 SLC11A1P49279 550 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 THOP1P52888 689 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 PKNOX1P55347 436 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 ZRSR2Q15696 482 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 SLC14A2Q15849 920 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 PPP1R3AQ16821 1122 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 SFT2D3Q587I9 215 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 KYQ8NBH2 561 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 DBF4BQ8NFT6 615 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 NPAS2Q99743 824 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 TMEM161AQ9NX61 479 aa18.77■□□□□ 0.6
TSPAN4-210ENST00000464987 A0A1W2PQ45 241 aaPredicted RBP18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 A0A1W2PQY0 241 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 SLC7A4O43246 635 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 TLR5O60602 858 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 WISP3O95389 354 aaPredicted RBP18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 PEX2P28328 305 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 TCTN1Q2MV58 587 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 ZNF549Q6P9A3 640 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 ADGRG6Q86SQ4 1221 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 KBTBD6Q86V97 674 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 SNX31Q8N9S9 440 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 HMGCLL1Q8TB92 370 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 CASD1Q96PB1 797 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 MKI67P46013 3256 aaKnown RBP18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 GBF1Q92538 1859 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 SCN5AQ14524 2016 aa18.77■□□□□ 0.59
TSPAN4-210ENST00000464987 UBFD1O14562 309 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 GOT2P00505 430 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 UBTFL6P0CB48 400 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 ATF6P18850 670 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 TACR2P21452 398 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 FGFR3P22607 806 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 TIAL1Q01085 375 aaKnown RBP eCLIP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 SP3Q02447 781 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 PRSS55Q6UWB4 352 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 GK5Q6ZS86 529 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 CUZD1Q86UP6 607 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 ABI1Q8IZP0 508 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 LGI2Q8N0V4 545 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 SPPL2BQ8TCT7 592 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 JADE3Q92613 823 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 GATA6Q92908 595 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 PTERQ96BW5 349 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 DDX50Q9BQ39 737 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 EBF3Q9H4W6 596 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 OLA1Q9NTK5 396 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 OR6C75A6NL08 312 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 ENPP3O14638 875 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 PRAMEF11O60813 436 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 AOC2O75106 756 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 RTN3O95197 1032 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 XRCC1P18887 633 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 KPNA2P52292 529 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 ATXN3P54252 364 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 TNK2Q07912 1038 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 GPR17Q13304 367 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 PARP15Q460N3 678 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 FUT10Q6P4F1 479 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 ISCA2Q86U28 154 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 OR7D4Q8NG98 312 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 SMIM14Q96QK8 99 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 POLR1EQ9GZS1 481 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 PDFQ9HBH1 243 aa18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.76■□□□□ 0.59
TSPAN4-210ENST00000464987 TCAF2A6NFQ2 919 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 ADAM12O43184 909 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 MT-CO1P00395 513 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 MS4A2Q01362 244 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 CEACAM7Q14002 265 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 ACAP2Q15057 778 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 ZNF423Q2M1K9 1284 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 PIGGQ5H8A4 983 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 CLEC6AQ6EIG7 209 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 PELI3Q8N2H9 469 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 PHC3Q8NDX5 983 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 BCL7CQ8WUZ0 217 aaPredicted RBP18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 EXT2Q93063 718 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 IFT43Q96FT9 208 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 GSTO2Q9H4Y5 243 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 STARD7Q9NQZ5 370 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 STK39Q9UEW8 545 aa18.75■□□□□ 0.59
TSPAN4-210ENST00000464987 CCDC162PA2VCL2 907 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 ALDH2P05091 517 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 HDCP19113 662 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 ZNF235Q14590 738 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 IL31Q6EBC2 164 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms