RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 A0A0C4DFX4 3053 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 CCDC78A2IDD5 438 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 F8W8V4 182 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 PAPLNO95428 1278 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 HMGA1P17096 107 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 CEBPBP17676 345 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 GABRB3P28472 473 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 GABRR2P28476 465 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 GCKP35557 465 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 PTDSS1P48651 473 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 MXRA7P84157 204 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 ZP2Q05996 745 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 THOC5Q13769 683 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 C6orf163Q5TEZ5 329 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 KIAA0930Q6ICG6 404 aaPredicted RBP12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 ESRP1Q6NXG1 681 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 ITIH5Q86UX2 942 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 TMC8Q8IU68 726 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 ADHFE1Q8IWW8 467 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 SCUBE1Q8IWY4 988 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 ZNF683Q8IZ20 524 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 FBXO27Q8NI29 283 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 KCNV2Q8TDN2 545 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 N4BP2L2Q92802 583 aaPredicted RBP12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 STMN2Q93045 179 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 C1QTNF1Q9BXJ1 281 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 ATXN3LQ9H3M9 355 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 YY1AP1Q9H869 796 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 ARNT2Q9HBZ2 717 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 TREX1Q9NSU2 369 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 ACOT9Q9Y305 439 aa12.19□□□□□ -0.46
SEC61A1-203ENST00000464451 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 MOSPD3O75425 235 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 CIB2O75838 187 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 PSMG1O95456 288 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 SLC35E2BP0CK96 405 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 SAT1P21673 171 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 ARNTP27540 789 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 CRABP2P29373 138 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 HK2P52789 917 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 RAB10P61026 200 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 CYP4F8P98187 520 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 RCN1Q15293 331 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 TEAD2Q15562 447 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 PRSS36Q5K4E3 855 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 LIPMQ5VYY2 423 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 METTL21CQ5VZV1 264 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 EPGNQ6UW88 154 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 GAREM2Q75VX8 874 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 NET1Q7Z628 596 aaPredicted RBP12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 DENND6AQ8IWF6 608 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 TMEM151AQ8N4L1 468 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 ZNF781Q8N8C0 355 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 ATP6V0D2Q8N8Y2 350 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 WDR60Q8WVS4 1066 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 FGF13Q92913 245 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 CMTM5Q96DZ9 223 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 ZNF570Q96NI8 536 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 UHRF1Q96T88 793 aaPredicted RBP12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 FAM167BQ9BTA0 163 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 ILKAPQ9H0C8 392 aaPredicted RBP12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 NOL6Q9H6R4 1146 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 COG4Q9H9E3 785 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 VPS45Q9NRW7 570 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 TMEM248Q9NWD8 314 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 CLIC5Q9NZA1 410 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 GMIPQ9P107 970 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 CPSF2Q9P2I0 782 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 RUVBL2Q9Y230 463 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 SHROOM3Q8TF72 1996 aa12.18□□□□□ -0.46
SEC61A1-203ENST00000464451 FAM95CA0A1B0GW59 222 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 FAM92AA1XBS5 289 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 PHGDHO43175 533 aaKnown RBP12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 PEX11BO96011 259 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 POU2F2P09086 479 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 STMN1P16949 149 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 YWHAQP27348 245 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 PSEN1P49768 467 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 COPAP53621 1224 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 WNT3AP56704 352 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 EFEMP1Q12805 493 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 CTBP1Q13363 440 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 TAF11Q15544 211 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 CCDC6Q16204 474 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 CNGA3Q16281 694 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 TRMT5Q32P41 509 aaKnown RBP12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 FSCBQ5H9T9 825 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 MS4A13Q5J8X5 152 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 ACBD5Q5T8D3 534 aaPredicted RBP12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 MARC1Q5VT66 337 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 KDELC1Q6UW63 502 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 KIAA0408Q6ZU52 694 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 SLC41A1Q8IVJ1 513 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 ULK2Q8IYT8 1036 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 TDRD5Q8NAT2 981 aaKnown RBP12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 C2CD4AQ8NCU7 369 aaPredicted RBP12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 GABPB2Q8TAK5 448 aaPredicted RBP12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 SHKBP1Q8TBC3 707 aa12.17□□□□□ -0.46
SEC61A1-203ENST00000464451 STYXQ8WUJ0 223 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms