RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.47■□□□□ 0.875e-6■□□□□ 8.2
TUBGCP3-204ENST00000464139 SKAP2O75563 359 aaPredicted RBP20.47■□□□□ 0.87
TUBGCP3-204ENST00000464139 PPARGP37231 505 aaPredicted RBP20.47■□□□□ 0.87
TUBGCP3-204ENST00000464139 KLC3Q6P597 504 aa20.47■□□□□ 0.87
TUBGCP3-204ENST00000464139 LMNTD2Q8IXW0 634 aa20.47■□□□□ 0.87
TUBGCP3-204ENST00000464139 OR13C4Q8NGS5 318 aa20.47■□□□□ 0.87
TUBGCP3-204ENST00000464139 TTPALQ9BTX7 342 aa20.47■□□□□ 0.87
TUBGCP3-204ENST00000464139 ZNF385DQ9H6B1 395 aa20.47■□□□□ 0.87
TUBGCP3-204ENST00000464139 FKBP6O75344 327 aa20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 IPO13O94829 963 aaKnown RBP20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 GJB5O95377 273 aa20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 ARSAP15289 507 aa20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 KCNC1P48547 511 aa20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 CCDC28BQ9BUN5 200 aa20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 ALG9Q9H6U8 611 aa20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 PDFQ9HBH1 243 aa20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 HMX1Q9NP08 348 aaPredicted RBP20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 ZFP37Q9Y6Q3 630 aaPredicted RBP20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 GOT2P00505 430 aaKnown RBP20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 SULT2A1Q06520 285 aa20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 SLC14A2Q15849 920 aa20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 CPSF7Q8N684 471 aaKnown RBP20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 MICAL1Q8TDZ2 1067 aa20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 SPON2Q9BUD6 331 aa20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 NACA2Q9H009 215 aa20.46■□□□□ 0.87
TUBGCP3-204ENST00000464139 H7C4K7 107 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 MTTPP55157 894 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 RPS24P62847 133 aaKnown RBP20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 CYLC2Q14093 348 aaPredicted RBP20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 ARMC3Q5W041 872 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 IL31Q6EBC2 164 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 ANKS3Q6ZW76 656 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 FBXO22Q8NEZ5 403 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 FAM136AQ96C01 138 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 RCN3Q96D15 328 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 FEM1CQ96JP0 617 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 COPG1Q9Y678 874 aaKnown RBP20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 CCDC162PA2VCL2 907 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 SDHDO14521 159 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 ACSL4O60488 711 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 RBP1P09455 135 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 HOXD9P28356 352 aaPredicted RBP20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 ATP5C1P36542 298 aaKnown RBP20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 SEMA3AQ14563 771 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 ACAP2Q15057 778 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 ZRSR2Q15696 482 aaKnown RBP20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 ZNF549Q6P9A3 640 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 RNF111Q6ZNA4 994 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 NPAS4Q8IUM7 802 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 RP9Q8TA86 221 aaKnown RBP20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 UCMAQ8WVF2 138 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 MIEF2Q96C03 454 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 EXOC2Q96KP1 924 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 ZNF512Q96ME7 567 aaPredicted RBP20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 NSMCE3Q96MG7 304 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 ZNF184Q99676 751 aaPredicted RBP20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 DNMT3LQ9UJW3 386 aa20.45■□□□□ 0.86
TUBGCP3-204ENST00000464139 CD3EAPO15446 510 aaKnown RBP20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 GLP2RO95838 553 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 FGF1P05230 155 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 PRSS56P0CW18 603 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 TSPAN8P19075 237 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 GNA12Q03113 381 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 AAGABQ6PD74 315 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 DENND1CQ8IV53 801 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 DSELQ8IZU8 1212 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 KYQ8NBH2 561 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 PXYLP1Q8TE99 480 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 SEPT8Q92599 483 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 GPBP1L1Q9HC44 474 aaPredicted RBP20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 LRCH1Q9Y2L9 728 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 SERPINF2P08697 491 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 HLA-DPA1P20036 260 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 RGRP47804 291 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 KPNA1P52294 538 aaPredicted RBP20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 ELAVL2Q12926 359 aaKnown RBP20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 BFSP2Q13515 415 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 GALNT7Q86SF2 657 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 SCLYQ96I15 445 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 COMMD8Q9NX08 183 aa20.44■□□□□ 0.86
TUBGCP3-204ENST00000464139 TRPC5OSA6NMA1 111 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 UPP2O95045 317 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 WISP3O95389 354 aaPredicted RBP20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 IZUMO2Q6UXV1 221 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 ISCA2Q86U28 154 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 CUZD1Q86UP6 607 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 RYBPQ8N488 228 aaPredicted RBP20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 MAELQ96JY0 434 aaKnown RBP20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 ZBTB26Q9HCK0 441 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 SMNDC1O75940 238 aaKnown RBP eCLIP20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 SP100P23497 879 aaPredicted RBP20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 OR1D2P34982 312 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 ACVR1Q04771 509 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 SMARCB1Q12824 385 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 FAM126BQ8IXS8 530 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 BRSK1Q8TDC3 778 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 EXT2Q93063 718 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 PTERQ96BW5 349 aa20.43■□□□□ 0.86
TUBGCP3-204ENST00000464139 CCDC126Q96EE4 140 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms