RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 PARD6AQ9NPB6 346 aa19.03■□□□□ 0.64
LMNB1-204ENST00000463908 B4GALT6Q9UBX8 382 aa19.03■□□□□ 0.64
LMNB1-204ENST00000463908 FAM153AQ9UHL3 310 aa19.03■□□□□ 0.64
LMNB1-204ENST00000463908 GMEB2Q9UKD1 530 aa19.03■□□□□ 0.64
LMNB1-204ENST00000463908 SAR1BQ9Y6B6 198 aa19.03■□□□□ 0.64
LMNB1-204ENST00000463908 TNRC6BQ9UPQ9 1833 aaKnown RBP19.02■□□□□ 0.64
LMNB1-204ENST00000463908 ANKRD36A6QL64 1941 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 A0A0J9YYE9 177 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 A0A0U1RQS6 177 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 LOC285095A0A1B0GVY8 99 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 ANKRD66B4E2M5 251 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 PGRMC1O00264 195 aaKnown RBP19.02■□□□□ 0.64
LMNB1-204ENST00000463908 SLC31A1O15431 190 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 ZNF189O75820 626 aaPredicted RBP19.02■□□□□ 0.64
LMNB1-204ENST00000463908 STK10O94804 968 aaKnown RBP19.02■□□□□ 0.64
LMNB1-204ENST00000463908 TRBC1P01850 177 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 PSMB4P28070 264 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 LIG3P49916 1009 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 WNT3AP56704 352 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 RPL26P61254 145 aaKnown RBP19.02■□□□□ 0.64
LMNB1-204ENST00000463908 SPEM2Q0P670 501 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 QPCTQ16769 361 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 KCTD19Q17RG1 926 aaPredicted RBP19.02■□□□□ 0.64
LMNB1-204ENST00000463908 ITPRIPL1Q6GPH6 555 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 ERAP2Q6P179 960 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 TTC27Q6P3X3 843 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 SYT10Q6XYQ8 523 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 LIPIQ6XZB0 460 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 KLHDC8BQ8IXV7 354 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 PAF1Q8N7H5 531 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 TRIM44Q96DX7 344 aaPredicted RBP19.02■□□□□ 0.64
LMNB1-204ENST00000463908 VPS45Q9NRW7 570 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 HOMER3Q9NSC5 361 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 NCDNQ9UBB6 729 aa19.02■□□□□ 0.64
LMNB1-204ENST00000463908 RPL26L1Q9UNX3 145 aaKnown RBP19.02■□□□□ 0.64
LMNB1-204ENST00000463908 EP300Q09472 2414 aaPredicted RBP19.01■□□□□ 0.63
LMNB1-204ENST00000463908 NPIPB15A6NHN6 443 aaPredicted RBP19.01■□□□□ 0.63
LMNB1-204ENST00000463908 RAD51BO15315 384 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 GM2AP17900 193 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 LHCGRP22888 699 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 GALNT3Q14435 633 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 CDKN3Q16667 212 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 CYP1B1Q16678 543 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 PARP6Q2NL67 630 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 TSPAN33Q86UF1 283 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 ZCCHC9Q8N567 271 aaKnown RBP19.01■□□□□ 0.63
LMNB1-204ENST00000463908 LPCAT1Q8NF37 534 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 CXorf40AQ8TE69 158 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 ASB12Q8WXK4 309 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 SLC6A18Q96N87 628 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 KLF6Q99612 283 aaPredicted RBP19.01■□□□□ 0.63
LMNB1-204ENST00000463908 TM9SF3Q9HD45 589 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 TPX2Q9ULW0 747 aaKnown RBP19.01■□□□□ 0.63
LMNB1-204ENST00000463908 CA5BQ9Y2D0 317 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 SPAG17Q6Q759 2223 aa19.01■□□□□ 0.63
LMNB1-204ENST00000463908 PDE2AO00408 941 aaPredicted RBP19■□□□□ 0.63
LMNB1-204ENST00000463908 BCAT2O15382 392 aaPredicted RBP19■□□□□ 0.63
LMNB1-204ENST00000463908 EPOP01588 193 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 WNT1P04628 370 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 ATXN1LP0C7T5 689 aaKnown RBP19■□□□□ 0.63
LMNB1-204ENST00000463908 ZNF806P0C7X5 589 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 ZSCAN5DPP0CG00 497 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 CA4P22748 312 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 CASQ1P31415 396 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 VIPR1P32241 457 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 HOXD12P35452 270 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 MPP3Q13368 585 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 P3H1Q32P28 736 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 SETMARQ53H47 684 aaPredicted RBP19■□□□□ 0.63
LMNB1-204ENST00000463908 CRTC1Q6UUV9 634 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 C12orf50Q8NA57 414 aaPredicted RBP19■□□□□ 0.63
LMNB1-204ENST00000463908 MAGOHBQ96A72 148 aaKnown RBP19■□□□□ 0.63
LMNB1-204ENST00000463908 CENPTQ96BT3 561 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 SERAC1Q96JX3 654 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 CAPZA3Q96KX2 299 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 NAP1L3Q99457 506 aaPredicted RBP19■□□□□ 0.63
LMNB1-204ENST00000463908 ADGRE3Q9BY15 652 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 FZD3Q9NPG1 666 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 DMTF1Q9Y222 760 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 COQ6Q9Y2Z9 468 aa19■□□□□ 0.63
LMNB1-204ENST00000463908 A0A1B0GTW7 788 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 TM7SF2O76062 418 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 HEXIM1O94992 359 aaKnown RBP18.99■□□□□ 0.63
LMNB1-204ENST00000463908 NDST3O95803 873 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 AGTP01019 485 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 IFNB1P01574 187 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 C6P13671 934 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 RPL22P35268 128 aaKnown RBP18.99■□□□□ 0.63
LMNB1-204ENST00000463908 ADRA1AP35348 466 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 NUDT1P36639 197 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 DPP6P42658 865 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 GRIA4P48058 902 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 EPHB1P54762 984 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 RACK1P63244 317 aaKnown RBP18.99■□□□□ 0.63
LMNB1-204ENST00000463908 IRX4P78413 519 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 PTSQ03393 145 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 OLIG2Q13516 323 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 CNGA3Q16281 694 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 DUOXA1Q1HG43 343 aa18.99■□□□□ 0.63
LMNB1-204ENST00000463908 KCTD11Q693B1 232 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms