RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 USP45Q70EL2 814 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 PEX26Q7Z412 305 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 TP53I13Q8NBR0 393 aaPredicted RBP13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 ARRDC2Q8TBH0 407 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 TFB1MQ8WVM0 346 aaKnown RBP13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 BMFQ96LC9 184 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 TBATAQ96M53 351 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 NSMCE3Q96MG7 304 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 LGMNQ99538 433 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 PCDHGC4Q9Y5F7 938 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 RAI2Q9Y5P3 530 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 CFAP54Q96N23 3096 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 LRRK1Q38SD2 2015 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 GOLGA6L3A6NEY3 463 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 APOC4-APOC2K7ER74 178 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 RAD51BO15315 384 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 JCHAINP01591 159 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 APOC2P02655 101 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 EPHA8P29322 1005 aaPredicted RBP13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 DYNLT1P63172 113 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 FAM193AP78312 1265 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 AP1B1Q10567 949 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 LRRC14Q15048 493 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 PSAPL1Q6NUJ1 521 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 Q6ZSR6 202 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 PTAR1Q7Z6K3 402 aaPredicted RBP13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 LRRC8AQ8IWT6 810 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 DEFB124Q8NES8 71 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 OR13H1Q8NG92 308 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 ATL2Q8NHH9 583 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 BAHD1Q8TBE0 780 aaPredicted RBP13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 SCRN2Q96FV2 425 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 FERMT1Q9BQL6 677 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 WRAP53Q9BUR4 548 aaKnown RBP13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 FZD3Q9NPG1 666 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 PCOLCE2Q9UKZ9 415 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 PCDHB9Q9Y5E1 797 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 MACROD2A1Z1Q3 448 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 LZTS3O60299 673 aaPredicted RBP13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 CBFA2T3O75081 653 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 MAP3K6O95382 1288 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 CCDC175P0C221 793 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 ELFN1P0C7U0 828 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 DSC2Q02487 901 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 MTM1Q13496 603 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 SHBQ15464 509 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 LRRC73Q5JTD7 316 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 KAZNQ674X7 775 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 NPNTQ6UXI9 565 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 LIPIQ6XZB0 460 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 SAP25Q8TEE9 199 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 QKIQ96PU8 341 aaKnown RBP eCLIP13.12□□□□□ -0.311e-6■■■■□ 25
R3HDM1-213ENST00000463230 TDRD1Q9BXT4 1180 aaKnown RBP13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 SLC25A51Q9H1U9 297 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 KCNK1O00180 336 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 SH3BP5O60239 455 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 TJP3O95049 919 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 ADRB1P08588 477 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 HOXC4P09017 264 aaPredicted RBP13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 ZNF30P17039 623 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 TEAD1P28347 426 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 IGFALSP35858 605 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 CLDN2P57739 230 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 ZBTB17Q13105 803 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 TEX44Q53QW1 395 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 PIH1D2Q8WWB5 315 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 OSBPL8Q9BZF1 889 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 B4GALT6Q9UBX8 382 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 CA5BQ9Y2D0 317 aa13.12□□□□□ -0.31
R3HDM1-213ENST00000463230 SPTY2D1-AS1A0A0U1RR47 76 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 H3BM21 787 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 HEXIM1O94992 359 aaKnown RBP13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 ITGAVP06756 1048 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 PECAM1P16284 738 aaPredicted RBP13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 ITIH2P19823 946 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 NIPAL4Q0D2K0 466 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 NOMO1Q15155 1222 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 IRF4Q15306 451 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 KANSL1Q7Z3B3 1105 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 PARGQ86W56 976 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 CBARPQ8N350 705 aaPredicted RBP13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 CNTD1Q8N815 330 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 TTC13Q8NBP0 860 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 SETD7Q8WTS6 366 aaKnown RBP13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 PDCD6IPQ8WUM4 868 aaKnown RBP13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 BTN2A2Q8WVV5 523 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 TADA1Q96BN2 335 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 IMP4Q96G21 291 aaKnown RBP13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 COQ10AQ96MF6 247 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 LYSMD1Q96S90 227 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 SRPK1Q96SB4 655 aaKnown RBP13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 MYOCQ99972 504 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 TRHDEQ9UKU6 1024 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 DMXL1Q9Y485 3027 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 PCNX2A6NKB5 2137 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 POM121BA6NF01 834 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 TRIM16O95361 564 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 HNRNPKP61978 463 aaKnown RBP eCLIP13.11□□□□□ -0.315e-7■□□□□ 9.7
R3HDM1-213ENST00000463230 SKOR1P84550 965 aa13.11□□□□□ -0.31
R3HDM1-213ENST00000463230 WSCD2Q2TBF2 565 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms